Pestalotiopsis fici: PFICI_01414
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Entry
PFICI_01414 CDS
T04924
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_01414
03012 Translation factors [BR:
pfy03012
]
PFICI_01414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfy04147
]
PFICI_01414
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PFICI_01414
mRNA cycle factors
Stress granule specific factors
PFICI_01414
Translation factors [BR:
pfy03012
]
Eukaryotic type
Initiation factors
eIF-4
PFICI_01414
Exosome [BR:
pfy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PFICI_01414
Exosomal proteins of bladder cancer cells
PFICI_01414
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
CMS1
fragilysinNterm
IL17R_D_N
Motif
Other DBs
NCBI-GeneID:
19266427
NCBI-ProteinID:
XP_007828186
UniProt:
W3XQQ5
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MADKGLEDIEQSQIESNYDETVDSFDEMNLRSELLRGVYAYGFERPSAIQQRAIMPVIKG
HDVIAQAQSGTGKTATFSISVLQKIDPSLKACQALILAPTRELAQQIQKVVIALGDFMNI
ECHACIGGTSVRDDMKALQDGPQVVVGTPGRVQDMIQRRFLKTDSMKMFVLDEADEMLSR
GFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFY
IAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ
RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKG
VSINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagggtttggaggacatcgagcagagtcagatcgagtccaactacgatgag
accgtcgactccttcgatgagatgaacctccgttcggagctcctccgtggtgtctacgcc
tacggtttcgagcgtccctctgctatccagcagcgtgccattatgcccgttattaagggc
catgatgttatcgcccaggcccagtctggtactggaaagaccgctaccttctcgatctcc
gtccttcagaagatcgaccccagcctgaaggcttgccaggctctgatccttgctcccacc
cgtgagctggctcagcagatccagaaggtcgtcatcgccctcggtgacttcatgaacatc
gagtgccacgcctgcattggtggtaccagcgttcgtgatgacatgaaggctctccaggac
ggcccccaggtcgttgtcggcactcccggtcgtgttcaggacatgatccagcgccgcttc
ctcaagaccgacagcatgaagatgttcgtcctcgacgaggctgatgagatgctttctcgt
ggtttcaccgagcaaatttacgacatcttccagctcctcccccagagcacccaggttgtc
ctcctgtctgccactatgccccaggacgtcttggaggtcaccaccaagttcatgcgcgac
cccgtccgtattctcgtcaagaaggacgagcttaccctggagggtatcaagcagttctac
attgccgtcgagaaggaggagtggaagctcgacaccctgtccgatctgtacgagactgtc
accatcacccaagccgtcatcttctgcaacacccgcagaaaggtcgactggctcaccgac
aagctcactgctcgtgacttcaccgtctctgccatgcacggtgacatggaccaggcccag
cgtgaccttatcatgaaggagttccgctctggatcttcccgtgtcctgattgccactgac
ctgttggcccgtggtatcgatgtccagcaggtttccctggtcatcaactacgatcttccc
gccaaccgcgagaactacatccaccgtatcggtcgtggtggtcgtttcggccgaaagggt
gtctccatcaacttcgtcactgccgacgatgtccgcatgatgagagagatcgagcaattc
tacagcacccagattgaggagatgcccatgaacgtcgccgacctcatctaa
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