KEGG   Pestalotiopsis fici: PFICI_02013
Entry
PFICI_02013       CDS       T04924                                 
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PFICI_02013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfy03009]
    PFICI_02013
Ribosome biogenesis [BR:pfy03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PFICI_02013
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Utp12 WD40_MABP1-WDR62_2nd Beta-prop_EML DSE1_N ASA1 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR41 CFAP251_N Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_DCAF4 Beta-prop_SCAP NBCH_WD40 Beta-prop_VPS8 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 WDR54 PROPPIN Beta-prop_WDR11_2nd RMC1_N Tricorn_2nd Beta-prop_LRRK2 eIF2A WD_LRWD1 Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_RIG_1st DIKK1-2-4_C-subdom1 RelA_RIS AAR2_1st UTP15_C
Other DBs
NCBI-GeneID: 19267026
NCBI-ProteinID: XP_007828785
UniProt: W3XQD7
LinkDB
Position
Unknown
AA seq 962 aa
MVKSYLKYEHSKSFGLVASGTSNLLWTPNDRSSTSAGQAVVAANEEVLTWDIKKGELLNR
WKDENCSAQVTAIAQSKTDKDVFAVGYEDGSVRLWDSKIATSIVSFNGHKSAITILAFDG
SGVRLASGSKDTDVIVWDLVAEVGQFKLRGHKDQITGLRFVEPQPEVAEEDGDQAMIVDG
SAAISEGFLLSTGKDALIKLWDLSSRHCIETHIAQTNGECWALGVSPDLSGCITGGNSGE
LKVWSLDTAGLAASRQQVDVPHNTQFLHDRGTLFRDGKDKATEIIFHPRRDYFTVHGAEK
AVEIWRIRSEAEIKKSLARKKKRRKEKLAKKGTAEAGDAEVDAEDEDISTAPITEAFAQH
LIVRTGGKVRSVDWANNHGHKELQLLVGTTNNQLELYNIQTKDKSTKSKQEDIPDYTRSL
GVDIPGHRADIRSLALSSDDRMLASASNGSLKIWNVKTRSCIRTFECGYALCCAFLPGDK
VVVVGTKAGELEVFDVASAQLLDSVSAHEGAIWSLQVHPDGRSMVSGSADKSAKFWDFKI
VQEEVLGTTRTTPKLKLVQSRQLKVSDDILSLRYSPDAKYLAVSLLDSTVKVFFTDSLKL
YLNLYGHKLPVLNMDISYDSKLIVTCSADKNIRIWGLDFGDCHKALFAHQDSILQVAFVP
HNNDGNGHHFFSASKDRTIKYWDGDKFEQIQRLDGHHGEIWALAMSRSGNFIISASHDKS
IRVWDETDEQIFLEEEREKEIEELYESTLTNSLERDPDDEEQNAEVAAASKQTVETLMAG
ERIQEALELGMADLHVVREWEEAKAANPNIAPPQRNPIFMAFGGISAEEYVLSVLQKIKA
SALHDALLVLPFATVPMLFTFLNLFAVRSMNIPLTCRILFFMLKTHHNQIVASKTMKAML
DGIRTNLRKALRRQKDEMGFNIAALKIVSMQIQDKSVKEYVDENWEDDDGQNVRKRAFVH
VS
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggtcaaatcatatctcaaatatgagcattcgaagtccttcggcctcgtagcgtccggc
acatccaatctactatggacacccaatgatcgatcgagcaccagcgctggccaggccgtg
gtcgctgccaacgaggaagttttgacttgggatatcaaaaagggcgagctcctaaaccga
tggaaggatgaaaactgctcggcgcaagtgaccgctattgcgcagagcaagaccgataaa
gacgtctttgctgtcggatacgaagacggaagtgtgcgtctctgggatagcaagattgct
accagcattgtgagcttcaacggccacaagtcggcaatcaccattcttgcattcgacgga
tctggcgtgcggcttgctagtggttctaaggatacagatgtcattgtttgggatctggtt
gccgaggtcggtcaattcaagctacgcggccacaaggatcaaatcacaggtcttcgattc
gtggagccacagccagaagttgccgaggaagatggcgatcaagccatgattgtcgatggg
tcggcggccatttccgagggtttcctgctctcgactggcaaggatgctttgatcaaactc
tgggatctctcgtcgcgacactgcatcgagacgcatattgcacagactaatggtgaatgc
tgggccttgggcgtctcgccagacctcagtggctgcatcactggcggcaactctggagaa
ctgaaagtgtggtctctcgataccgccggactggccgcatcgagacaacaagtcgatgtc
cctcataatacacaattcctccacgacaggggtactcttttccgtgacggcaaggacaaa
gcgaccgagatcattttccacccacgcagagattacttcacagtgcacggtgcagagaag
gccgtggagatttggcggatacgctccgaagccgagatcaagaagagtttggcacgtaag
aagaagagaagaaaggagaagctcgccaagaagggcacagcggaagccggagatgccgag
gtcgacgccgaagatgaggatatcagcactgcacccattacagaagcatttgcacaacac
ctaattgttcgaactggcggcaaagtaagaagtgttgactgggcaaataaccacggtcac
aaggaacttcaactactcgtgggaacgacaaataaccagcttgaactgtacaacatacaa
acaaaagacaagagcacaaagtctaaacaagaggatattcctgactataccagatctctt
ggagtcgatatccccggtcaccgggcggacatccgctccctggcattgagttccgatgac
agaatgcttgcctccgcatctaacggttctctcaagatctggaatgtgaagactaggtcc
tgtattagaacctttgagtgtggatatgcactttgctgcgcgttcctcccgggagacaaa
gttgttgtcgtcggcacaaaggctggtgagctcgaggtatttgacgtggcttcggcgcaa
ctccttgatagtgtttcggcgcacgagggtgcaatttggtcgctacaagtgcatccggat
ggtcgctcaatggtgtccggcagtgctgataagtcggctaaattctgggactttaaaatt
gtccaggaagaagtccttggaacgacacggacaacaccaaaactgaaactggtacaatcg
agacaactcaaagtctccgacgatatactcagtctcaggtactcgccagatgccaagtat
cttgcagtctcgctgttggacagcacggtgaaggtgtttttcacagactcgctcaagctc
tacttgaatctctatggccataagctgcctgtgctgaacatggacatctcctacgatagc
aaactcattgtgacctgttctgccgacaagaacattcgcatttggggtctcgactttggt
gattgccacaaggcactttttgcgcatcaggacagtattctacaggtcgctttcgtgccc
cacaacaacgatggtaatggtcatcactttttcagtgcaagcaaagaccgaactatcaag
tactgggatggagacaaatttgaacagatccaacgattggatggccaccatggtgagatc
tgggccctggcaatgagccggagcggcaacttcatcatcagtgctagtcatgataagagc
attcgtgtatgggacgaaaccgacgagcaaatcttcctcgaggaagagcgcgagaaggag
atcgaagagctgtacgagagtacactcaccaactcactcgagagagatccagacgacgaa
gagcagaatgccgaggttgcggctgccagcaagcagacagtggagacattgatggctggc
gaacgcattcaagaagcattggagctgggtatggctgatctgcacgtggtcagagaatgg
gaagaggccaaggcggcaaacccaaacatcgcaccaccacagcgaaatcccatattcatg
gcctttggtggcatcagtgctgaggagtatgtcctttctgtactgcaaaagatcaaggca
tcagcactacacgatgcgctgcttgtcctcccttttgcaacagtaccgatgcttttcacc
tttctaaacttgtttgctgtgagatcgatgaacattcctttgacctgtcggatattgttc
ttcatgctcaagacacatcacaaccagattgttgccagcaagacgatgaaagccatgctt
gatggtattagaaccaacctccggaaggcactgaggcggcaaaaggatgagatgggtttc
aacattgcagccctcaagattgtgagcatgcagatacaagacaagagtgttaaggagtat
gttgatgagaattgggaggatgacgacggacaaaacgtcaggaagcgcgcgttcgttcac
gtctcatag

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