Pestalotiopsis fici: PFICI_02013
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Entry
PFICI_02013 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFICI_02013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_02013
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PFICI_02013
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Utp12
WD40_MABP1-WDR62_2nd
Beta-prop_EML
DSE1_N
ASA1
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR41
CFAP251_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_SCAP
NBCH_WD40
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
WDR54
PROPPIN
Beta-prop_WDR11_2nd
RMC1_N
Tricorn_2nd
Beta-prop_LRRK2
eIF2A
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_RIG_1st
DIKK1-2-4_C-subdom1
RelA_RIS
AAR2_1st
UTP15_C
Motif
Other DBs
NCBI-GeneID:
19267026
NCBI-ProteinID:
XP_007828785
UniProt:
W3XQD7
LinkDB
All DBs
Position
Unknown
AA seq
962 aa
AA seq
DB search
MVKSYLKYEHSKSFGLVASGTSNLLWTPNDRSSTSAGQAVVAANEEVLTWDIKKGELLNR
WKDENCSAQVTAIAQSKTDKDVFAVGYEDGSVRLWDSKIATSIVSFNGHKSAITILAFDG
SGVRLASGSKDTDVIVWDLVAEVGQFKLRGHKDQITGLRFVEPQPEVAEEDGDQAMIVDG
SAAISEGFLLSTGKDALIKLWDLSSRHCIETHIAQTNGECWALGVSPDLSGCITGGNSGE
LKVWSLDTAGLAASRQQVDVPHNTQFLHDRGTLFRDGKDKATEIIFHPRRDYFTVHGAEK
AVEIWRIRSEAEIKKSLARKKKRRKEKLAKKGTAEAGDAEVDAEDEDISTAPITEAFAQH
LIVRTGGKVRSVDWANNHGHKELQLLVGTTNNQLELYNIQTKDKSTKSKQEDIPDYTRSL
GVDIPGHRADIRSLALSSDDRMLASASNGSLKIWNVKTRSCIRTFECGYALCCAFLPGDK
VVVVGTKAGELEVFDVASAQLLDSVSAHEGAIWSLQVHPDGRSMVSGSADKSAKFWDFKI
VQEEVLGTTRTTPKLKLVQSRQLKVSDDILSLRYSPDAKYLAVSLLDSTVKVFFTDSLKL
YLNLYGHKLPVLNMDISYDSKLIVTCSADKNIRIWGLDFGDCHKALFAHQDSILQVAFVP
HNNDGNGHHFFSASKDRTIKYWDGDKFEQIQRLDGHHGEIWALAMSRSGNFIISASHDKS
IRVWDETDEQIFLEEEREKEIEELYESTLTNSLERDPDDEEQNAEVAAASKQTVETLMAG
ERIQEALELGMADLHVVREWEEAKAANPNIAPPQRNPIFMAFGGISAEEYVLSVLQKIKA
SALHDALLVLPFATVPMLFTFLNLFAVRSMNIPLTCRILFFMLKTHHNQIVASKTMKAML
DGIRTNLRKALRRQKDEMGFNIAALKIVSMQIQDKSVKEYVDENWEDDDGQNVRKRAFVH
VS
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcatatctcaaatatgagcattcgaagtccttcggcctcgtagcgtccggc
acatccaatctactatggacacccaatgatcgatcgagcaccagcgctggccaggccgtg
gtcgctgccaacgaggaagttttgacttgggatatcaaaaagggcgagctcctaaaccga
tggaaggatgaaaactgctcggcgcaagtgaccgctattgcgcagagcaagaccgataaa
gacgtctttgctgtcggatacgaagacggaagtgtgcgtctctgggatagcaagattgct
accagcattgtgagcttcaacggccacaagtcggcaatcaccattcttgcattcgacgga
tctggcgtgcggcttgctagtggttctaaggatacagatgtcattgtttgggatctggtt
gccgaggtcggtcaattcaagctacgcggccacaaggatcaaatcacaggtcttcgattc
gtggagccacagccagaagttgccgaggaagatggcgatcaagccatgattgtcgatggg
tcggcggccatttccgagggtttcctgctctcgactggcaaggatgctttgatcaaactc
tgggatctctcgtcgcgacactgcatcgagacgcatattgcacagactaatggtgaatgc
tgggccttgggcgtctcgccagacctcagtggctgcatcactggcggcaactctggagaa
ctgaaagtgtggtctctcgataccgccggactggccgcatcgagacaacaagtcgatgtc
cctcataatacacaattcctccacgacaggggtactcttttccgtgacggcaaggacaaa
gcgaccgagatcattttccacccacgcagagattacttcacagtgcacggtgcagagaag
gccgtggagatttggcggatacgctccgaagccgagatcaagaagagtttggcacgtaag
aagaagagaagaaaggagaagctcgccaagaagggcacagcggaagccggagatgccgag
gtcgacgccgaagatgaggatatcagcactgcacccattacagaagcatttgcacaacac
ctaattgttcgaactggcggcaaagtaagaagtgttgactgggcaaataaccacggtcac
aaggaacttcaactactcgtgggaacgacaaataaccagcttgaactgtacaacatacaa
acaaaagacaagagcacaaagtctaaacaagaggatattcctgactataccagatctctt
ggagtcgatatccccggtcaccgggcggacatccgctccctggcattgagttccgatgac
agaatgcttgcctccgcatctaacggttctctcaagatctggaatgtgaagactaggtcc
tgtattagaacctttgagtgtggatatgcactttgctgcgcgttcctcccgggagacaaa
gttgttgtcgtcggcacaaaggctggtgagctcgaggtatttgacgtggcttcggcgcaa
ctccttgatagtgtttcggcgcacgagggtgcaatttggtcgctacaagtgcatccggat
ggtcgctcaatggtgtccggcagtgctgataagtcggctaaattctgggactttaaaatt
gtccaggaagaagtccttggaacgacacggacaacaccaaaactgaaactggtacaatcg
agacaactcaaagtctccgacgatatactcagtctcaggtactcgccagatgccaagtat
cttgcagtctcgctgttggacagcacggtgaaggtgtttttcacagactcgctcaagctc
tacttgaatctctatggccataagctgcctgtgctgaacatggacatctcctacgatagc
aaactcattgtgacctgttctgccgacaagaacattcgcatttggggtctcgactttggt
gattgccacaaggcactttttgcgcatcaggacagtattctacaggtcgctttcgtgccc
cacaacaacgatggtaatggtcatcactttttcagtgcaagcaaagaccgaactatcaag
tactgggatggagacaaatttgaacagatccaacgattggatggccaccatggtgagatc
tgggccctggcaatgagccggagcggcaacttcatcatcagtgctagtcatgataagagc
attcgtgtatgggacgaaaccgacgagcaaatcttcctcgaggaagagcgcgagaaggag
atcgaagagctgtacgagagtacactcaccaactcactcgagagagatccagacgacgaa
gagcagaatgccgaggttgcggctgccagcaagcagacagtggagacattgatggctggc
gaacgcattcaagaagcattggagctgggtatggctgatctgcacgtggtcagagaatgg
gaagaggccaaggcggcaaacccaaacatcgcaccaccacagcgaaatcccatattcatg
gcctttggtggcatcagtgctgaggagtatgtcctttctgtactgcaaaagatcaaggca
tcagcactacacgatgcgctgcttgtcctcccttttgcaacagtaccgatgcttttcacc
tttctaaacttgtttgctgtgagatcgatgaacattcctttgacctgtcggatattgttc
ttcatgctcaagacacatcacaaccagattgttgccagcaagacgatgaaagccatgctt
gatggtattagaaccaacctccggaaggcactgaggcggcaaaaggatgagatgggtttc
aacattgcagccctcaagattgtgagcatgcagatacaagacaagagtgttaaggagtat
gttgatgagaattgggaggatgacgacggacaaaacgtcaggaagcgcgcgttcgttcac
gtctcatag
DBGET
integrated database retrieval system