Pestalotiopsis fici: PFICI_02016 Help Entry PFICI_02016       CDS       T04924                                  Name (RefSeq) U2 snRNP component prp10   KO K12828   splicing factor 3B subunit 1 Organism pfy  Pestalotiopsis fici Pathway pfy03040   Spliceosome Brite KEGG Orthology (KO) [BR:pfy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     PFICI_02016  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:pfy03041]     PFICI_02016    03036 Chromosome and associated proteins [BR:pfy03036]     PFICI_02016 Spliceosome [BR:pfy03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     PFICI_02016  Complex B     PFICI_02016  Complex C    U2 SnRNP specific factors     PFICI_02016 Chromosome and associated proteins [BR:pfy03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     PFICI_02016 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT HEAT_EZ TOR1L1_N HEAT_EF3_N HEAT_2 Htt_N-HEAT_1 UTP20 mTOR_dom XMAP215_CLASP_TOG Adaptin_N UNC45-central Motif Other DBs NCBI-GeneID:  19267029 NCBI-ProteinID:  XP_007828788 UniProt:  W3XQ63 LinkDB All DBs Position Unknown AA seq 1220 aa AA seqDB search MSDADFETIRKLQQERNAAAAAKKGSRTFDPSNQRSDTSTKAKLTDSFDTDLYSRDGDDR FAGYLTSIPADGDNGDEEMADADADNSRRLVGQYTATQSQIDEFARGHGVEEDDPFAGRG ERSTRIADRETDYQKRRFDRVLTPTRADAFAANRQAGAADDGETYKDIMERRELEREEER VQRAIAAKRQEGEDANGEHEATLQNGDKENAEAGSTEAVTAGRKRKKRWDVSSTAVDEPE TGDAGKKRSRWDQAPSLAAPGAADAGKKRSRWDQAPTATPMGPSGLATPMHTSAIGGPVP SFGTDISGPNAPISDEELDELLPGPDDGYQILTPPPGYAPVRAPTHRVVATPVPTSGFMM QDPDSVRLGGAPMPKEIPGVGDLQFFKPEDMAYFGKLTDGSDEDALSVEELKERKIMRLL LKVKNGTPPMRKTALRQLTDNARNFGAGPLFNQILPLLMEKTLEDQERHLLVKVIDRILY KLDDMVRPYVHKILVVIEPLLIDQDYYARVEGREIISNLSKAAGLATMISTMRPDIDHVD EYVRNTTARAFAVVASALGIPALLPFLRAVCRSKKSWQARHTGVKIVQQIPILMGCAVLP HLKGLVDCIGPNLNDEQTKVRTVTSLAIAALAEASNPYGIESFDDILNPLWTGARKQRGK GLAGFLKAVGYIIPLMDEDYANYYTSQIMEILLREFSSPDEEMKKVVLKVVSQCAGTEGV TAGYLKEHVLDEFFKSFWVRRMALDKRNYRQVVETTVDIAQKVGVSEIVERIVGNLKDES EAYRKMTVETVEKVVASLGAADIGERLEERLIDGILHAFQEQGVEDVIMLNGFGTVVNAL GTRCKPYLPQIVSTILWRLNNKSATVRQQAADLISRIAMVMKQCGEDALMGKLGVVLYEY LGEEYPEVLGSILGALRSIVTVVGISQMQPPIKDLLPRLTPILRNRHEKVQENTIDLVGR IADRGPESVNAREWMRICFELLDMLKAHKKGIRRAANNTFGFIAKAIGPQDVLATLLNNL RVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEM AKDYVYAVTPLLEDALIDRDQVHRQTAASVVKHIALGVVGLGCEDAMVHLLNLLYPNLFE TSPHVIDRIIEAIEAIRMAVGPGLVMNYVWAGLFHPARRVRTPYWRLYNDAYVQAADAMV PYYPNLTDDGIDRPELAIVL NT seq 3663 nt NT seq  +upstreamnt  +downstreamnt atgtcggacgctgactttgagacgatcagaaagctccagcaagagcgcaatgctgccgca gctgccaagaaggggtcgcgtaccttcgaccccagcaaccagcgatccgacacgtccacc aaggccaagttgacggactccttcgacaccgatctctattcacgcgatggagatgacagg tttgcgggctatcttacctcgattcctgccgatggagacaacggcgacgaggagatggca gatgccgatgccgacaactcgcgaagactagttggccaatatacagccacccagtcccag attgacgaattcgcgcgcgggcacggagtcgaggaagatgatccatttgcaggccgcgga gagcgaagcactcgaattgccgaccgcgagaccgactatcagaagcgccgcttcgaccgt gttctcaccccaacccgcgctgacgcctttgctgctaatcgccaagctggcgcagctgac gatggcgagacctacaaagatatcatggagcgacgagagctcgagcgggaggaagaaagg gtacaacgggctatcgcagcaaagcgacaggagggcgaagatgccaacggcgaacacgaa gctaccctccagaatggagacaaggagaacgctgaagctggatcgaccgaggctgtgact gctggccgcaagcgaaagaagagatgggatgtctcgtccacggctgtcgatgagccagag acgggcgatgcggggaaaaaacgatcccgatgggaccaggctccctctctggctgctcct ggagcagctgatgctggcaagaagcgatcacgttgggatcaagcaccaactgccacgccg atgggtcctagtggtctcgctacgcccatgcacacctctgccattggagggcctgtgcct tcatttggaaccgacatctctgggccaaacgcccccatcagcgatgaggagttggacgag ttactgccaggacctgacgatggctaccaaatcctcacgccaccccctggatatgctccc gttcgagcacccacccacagagttgttgccacccccgtgcccaccagtggcttcatgatg caggatccagatagtgtcagattgggtggtgctccaatgccaaaggaaatcccaggtgtt ggtgatcttcagttcttcaagcctgaggatatggcatattttggcaagctcaccgatggc tcagacgaagatgctctcagcgtggaagagctcaaggagcgaaagatcatgagactgctt ctcaaggtcaagaacggaactccaccaatgcgtaagactgctctcaggcagctaaccgac aatgcacgtaactttggtgctggacctctgttcaatcaaattctacccctgctcatggag aagacccttgaagaccaggaacgccatttgctcgtcaaggttattgaccgtattctctac aaactagacgatatggtgcggccttatgtacacaagatcctggtcgttattgagcctctt cttatcgaccaagactactatgcccgagtcgaaggtcgagagattatctccaatctcagt aaagcggctggtttagcgaccatgatcagtaccatgagaccagatattgaccacgttgat gagtatgtgcgaaacaccacggctcgtgcttttgccgttgtcgcatcggctctaggcatt ccagcactcctgccattccttcgcgccgtatgccgcagcaagaaatcatggcaggctcga cacactggtgtgaagattgtccaacaaattcccatcctgatgggttgcgccgttctgcct cacctcaagggactagtagactgtatcggccctaacctcaacgacgagcagaccaaagtc cgaacggtgaccagtttggcgattgcagctctagcagaggcatcaaacccgtacggtatt gagagcttcgacgacattctcaaccccctatggactggtgctagaaagcaacgaggcaaa ggtcttgctggtttcttgaaggccgtcggttacatcatccctcttatggacgaggattat gccaattattacactagccaaatcatggagattcttctcagagaattctcctcgccggac gaggaaatgaaaaaggttgttttgaaggtggtatctcagtgcgctggcaccgagggtgtg acagcagggtacctcaaggaacatgtgctagatgagtttttcaagagtttctgggtacgc cgtatggctctggataagagaaactataggcaggtggtggagacgacggtcgacattgct caaaaggtaggagttagtgagattgtcgagcgcattgttggcaaccttaaggatgagtct gaggcatatcgaaagatgactgttgaaacagtcgagaaagtggtggccagtctaggtgca gcggatattggagaaagattggaggagcgcctgatcgatggtatcctccatgctttccag gagcaaggtgttgaagacgtcatcatgctgaacggtttcggcactgtcgtcaatgctctg ggtactcgttgcaagccatatctcccccagattgtcagcaccatcctgtggcgcctcaac aacaagtcagccacggtccgacagcaagcagccgacctcatctcccgtattgctatggtc atgaagcagtgtggcgaggacgcgctcatgggcaagcttggtgtggttctctacgaatac ctgggtgaggaatacccagaagtgctaggatccattctgggtgccttgcgttcgatcgtc acagtcgttggtatcagccagatgcaaccgccgatcaaggacctactcccacgtttgact cctattctacgaaatcgacacgaaaaggtgcaggaaaacaccatcgacctcgtcggacgt atcgcagatcgtggaccagaaagtgtcaatgctcgcgagtggatgcgtatctgcttcgag ctgctcgacatgttgaaggctcacaagaagggtattcgaagagctgccaacaacacattt ggtttcatcgccaaggccattggacctcaggatgtcctggcaacgctcctcaacaacttg cgtgtccaagagcgtcaatcgcgtgtctgtacggccgttgccattggtatcgtcgcggag acttgtgcgccgttcactgtgctgccagccctcatgaacgaatatcgggtgcccgagctg aacgtccaaaatggtgttctcaagtccttatccttcctctttgagtatatcggtgagatg gcaaaggactatgtctacgctgtcacgccactattggaagatgcgttgattgatcgcgac caggtgcacagacagacggcggcatctgtcgtcaagcacattgcactaggagttgtcggc ctaggctgtgaggatgcgatggtccatctcctcaacttactttaccccaacctctttgaa acatcgccacacgttatcgatcgtatcattgaggccatcgaggccatccgtatggctgtt ggtcccggcttggtcatgaactatgtttgggcaggcctgttccaccctgctcgaagggtg cggactccatattggagattgtacaatgacgcatacgtgcaggcggctgatgctatggtg ccatactatcccaatttgacggacgatggcatcgaccggcctgaattagcgattgtgctg taa

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