Pestalotiopsis fici: PFICI_02514
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Entry
PFICI_02514 CDS
T04924
Name
(RefSeq) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_02514
Enzymes [BR:
pfy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PFICI_02514
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PFICI_02514
Prokaryotic type
PFICI_02514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
19267527
NCBI-ProteinID:
XP_007829286
UniProt:
W3XEP8
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MATMPLKRGRPPKGTFDDPKDVAAGTTPLKRGRPPKRQVPDVEPEDLDASNKKFKLANGS
SNLRDPHPFSAEAEEHGIVLRKYYPHEMSNARALAYNNNEIPRPIETLLGALEGTGQTRK
GIKAKDAVVHWFKMDLRTSDNRALWLASQKAKEAGVPLIGLYVISPEDFKAHLTAPVRID
FMIRTLHVLKQDLAALDIPLYVETVETRKDVPERIIEFLEEWGVSHLFANMEYEVDELRR
DANLIKTCAEKGIDMQVVHDTCVVPPGLLTSGSGKQYSVYSPWRRAWVAKIHADPELLNL
FDAPEKNPANARDKVAALFDCEIPDVPEGHQLSEKDAQRLHAIWPAGEHEARARLEKFCD
EKIGQYHNARNFPAGVSTSNISVHLAAGTLSARTAVRYARDRNKTKKLDAGMEGIQTWIS
ELAWRDFYKHVMVNWPYICMNKPFKPEYSNITWSYNMAHFDAWKTGHTGFPIVDAAMRQV
QSMSWMHNRCRMIVASFLAKDLLLDWRMGERYFMENLIDGDFASNNGGWGFSASVGVDPQ
PYFRIFNPVLQSEKFDPKGEYIKKWVPELRECNEKEVHDPYGRGAAKKVEKMGYPKPIVV
HKDSRDRALAVYKEGLGRDKP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatgccactcaagcgaggtcgtcctcccaagggcacgtttgatgacccaaag
gacgttgccgcgggcaccacaccactcaagcgaggccgtccgccaaagcgccaggtgccc
gacgttgagccagaggatctagatgcttcaaacaagaaattcaagctcgcaaacggctcc
tcaaacttgcgcgatcctcaccccttctccgccgaagcagaagagcatggaattgtgctc
cgtaaatactacccacacgagatgagcaatgctcgcgcgctcgcctacaataacaacgag
ataccgcgtcccattgagacattgcttggcgcactggaaggcacagggcagacgcgcaag
ggcatcaaggctaaagacgctgtcgtgcactggttcaagatggaccttcgaacctcggac
aatcgtgccctgtggcttgcaagtcaaaaggcgaaagaagctggagtaccattgattggc
ctatacgttattagtcccgaggactttaaggcgcatctgactgcgcctgttcgcatcgac
tttatgattcgcacattgcacgttctgaaacaagacctggccgcactggatattccactc
tatgttgaaaccgtagaaacccgaaaagatgtgcctgagcgcatcattgaattcttggag
gaatggggcgtaagccatttgtttgccaatatggaatacgaggtggatgagctacgccgg
gatgcgaatttgataaaaacctgtgctgagaagggcattgatatgcaggttgtccatgat
acctgtgttgttccgcccgggctgctcacgagcggcagtggaaaacaatactccgtgtac
agcccgtggagacgggcatgggtcgccaagattcacgctgacccagagctgctcaacttg
tttgacgctcccgagaagaacccagccaatgcgcgagacaaggttgctgccctctttgat
tgcgagattcccgacgtgccagaggggcaccagctgtctgaaaaagacgcgcaacgtcta
cacgccatatggccggcaggcgagcatgaagccagagccagactcgagaaattttgcgat
gaaaagatcgggcaatatcataacgcaagaaattttccagctggtgtcagtacctcgaac
atttctgtgcatcttgcagccggcactctcagtgcgagaactgcggtccgatatgcgcgt
gatcgaaacaagacaaagaaattggatgctggcatggagggaatccagacttggatcagc
gagttggcctggcgtgatttctacaagcacgtcatggtcaactggccatatatctgcatg
aacaagcctttcaagcctgaatattcgaatattacctggtcctacaacatggcacacttt
gatgcttggaagacggggcacacgggatttccgatagtcgacgccgccatgcgccaggtc
cagtccatgtcgtggatgcataatcgctgccgcatgatcgtggcttcgtttctcgccaag
gacctgctgcttgattggcggatgggagagcgctactttatggagaatctgattgatggg
gattttgcgtccaacaatggtggctggggcttcagcgccagcgtcggagtcgatccgcaa
ccatattttagaatcttcaacccggtgcttcagagcgaaaagttcgatcccaagggcgaa
tacattaagaagtgggtgccagagctgagggaatgcaatgagaaggaggtgcacgacccg
tatggcagaggcgctgcaaagaaggttgagaagatgggctatccgaagcccattgttgtg
cacaaggactcgagggatcgggccttggctgtgtacaaggaagggctggggcgggataag
ccttga
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