Pestalotiopsis fici: PFICI_02827
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Entry
PFICI_02827 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_02827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_02827
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PFICI_02827
mRNA degradation factors
3'-5' decay
Pan complex
PFICI_02827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
X8
Motif
Other DBs
NCBI-GeneID:
19267840
NCBI-ProteinID:
XP_007829599
UniProt:
W3XHA6
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MDSRKTPGLLPTATALRRQLVDDDTDDGDSHDQSSSQELPASTSAVEANHSLELTRDDTS
PDHFNTESYEDFPSLSTSAQIAALPKRQQLNKGKGKAMLSPVNLEIDTGGFIVEAPRVPQ
SPPAMAEARLARFNFGNAAFEATPVPLASSSSSSSSALSTPASFNQPSTSEAEISRLRRA
PTAFKPQHARCDETCPFANLFDSAKKQLNVDSPSFTPAQLLGGTKKSTFSSQTANATPFT
PKGAANTTAQAMHQDGDTGFMNPAAVREFTPQTQNYDLNTSSTSNGINADSNTGLYEAFS
MVGMNQALSTQFNPYAEDHNPLAAAAGASYYPNPGLYTAPVQPLQYHLYAPVGPARSDLA
AYQRQAHDFFISNEFREDLQKKSAATRQVMQSSQLPEVQPYHSLVPLEGPKSGQSSLFGN
VVCWVYKATSKKNGHVYCLRRLQGARVSGKESTNTPLSKWKRISSGGIVTPVEVFTSRDF
GDTSLIFIHNYHPCSKTLAEQHFTGGRFKPSIAESSLWSYISQICNALKTIHNGELAARC
IHPTKIILTEKNRIRLSACMILDVLEYDNPRPLAELQHEDLVDLGKLILSLCLNQNQIHN
VQASWQSFQQTNYSAELKELVFWLISPPSAEAPEQKHIGFLLQSIAHHLFDSFDASLHAY
DEITSEIHKELENGRIARLLMKLGTINERPEFDNDPNWAENGERYTLKLFRDYVFHQVDA
NNNPVLNLGHMLSCLNKLDAGIDEKVFMTSRDHQTSFVVTYKELKKQVTNAFQELQKAGQ
PKTAAPRGVF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggattcccgaaaaacgcctggtctgcttcctacggcgacagcgcttcggcgccagctt
gtcgatgatgatactgatgatggtgattcccatgatcaatcatcgtctcaagaacttccc
gctagcacttcggctgttgaagcaaatcacagcctcgagcttaccagggatgacacatcc
ccggaccattttaatacggagagctacgaagactttccgtctctatctacttctgcgcag
attgctgcactgcctaaacgccagcaattgaacaaaggcaagggcaaggccatgctgagt
ccagtgaacctcgagattgatacgggcggtttcattgtagaggcaccgagagtcccacag
agccctccagccatggcagaagcaaggttggcccgtttcaatttcggaaatgcagcattt
gaagccacacccgtgcctcttgcatcatcatcatcatcatcatcatctgcattgtccact
ccagcgagcttcaaccagccttccacaagcgaagccgaaatctctcgtttacgtcgagca
cctacagcattcaaaccacaacatgcgagatgtgacgagacttgtccatttgctaacctg
tttgacagtgccaaaaagcaactcaatgtcgactcgccctctttcactcctgcccagctg
ctgggaggcaccaagaaatccaccttttcttcccagactgccaatgcgacacccttcact
ccgaaaggggccgcaaatactactgcccaggccatgcatcaggatggcgacacaggcttt
atgaatccagcggccgtgcgggaatttacaccgcagacgcaaaactacgacctcaacacg
agttccacgtccaatggcataaacgccgactccaatactggcctgtatgaagcattttct
atggtcggcatgaaccaggcgctctctacccaattcaatccatatgccgaagatcacaac
cctttggcggctgcggccggtgcgtcgtactatccgaatccgggtttgtatactgcgcct
gttcaaccattgcaataccatctctacgcacccgtcggccctgccagatcagatttggcg
gcctaccagcgccaagctcatgatttcttcatctccaacgaattcagagaggatcttcaa
aagaagtctgcagcaacccggcaggtaatgcagagttctcagctacctgaagtccagcca
taccattctcttgtcccgctggaagggcccaagagcggccaatccagcctctttggtaat
gttgtatgctgggtatacaaggctacttccaaaaagaatgggcatgtctactgtctacgt
aggcttcaaggtgcccgagtgagtggcaaggagtcaacaaatactccacttagcaagtgg
aaacgcatcagcagtggtggcatcgtgacgccagtcgaggtgttcacctcgagagatttt
ggcgacacgtccctcatcttcattcacaactaccacccttgctccaagactttggccgaa
cagcatttcacgggtggtcgtttcaagccctccattgcagaaagctcgctctggagctat
atatcccagatttgcaatgcgctcaagacaattcacaatggcgagctggcagcacgctgc
attcacccaaccaagatcatcctgaccgagaagaatcgcatccggctgagtgcctgcatg
attctggacgttctggaatacgacaatccccgtcccttggcagagctccagcatgaggat
ctggtagatctgggcaagctcatcttaagcctctgccttaaccaaaaccaaatccacaat
gttcaagcctcctggcaatctttccagcagaccaattattctgcggagctcaaggagctc
gtcttttggctgatctcacctccaagcgccgaagcaccagagcagaaacacattggcttc
ttactacaatcaatcgcccaccacctctttgactcttttgatgcctctctccacgcttac
gacgagatcacatccgagattcacaaggagcttgagaatggcagaattgcccgactgctg
atgaagcttggcacgattaatgagaggcccgagttcgataacgatccaaactgggctgag
aatggcgagcgctataccttgaagttattccgcgactacgtctttcaccaggttgatgcc
aataataaccctgttctgaacttgggtcacatgctttcgtgcttgaacaaactggatgct
gggatcgacgagaaggttttcatgacaagccgtgatcatcaaacgtcttttgtggtcacc
tacaaagagctgaagaaacaggtaaccaacgccttccaggaactccagaaagctggccag
ccgaaaactgcagcgccccgcggcgtgttctag
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