Pestalotiopsis fici: PFICI_02983
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Entry
PFICI_02983 CDS
T04924
Name
(RefSeq) rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PFICI_02983
Enzymes [BR:
pfy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PFICI_02983
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Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
19267996
NCBI-ProteinID:
XP_007829755
UniProt:
W3XFT0
LinkDB
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Position
Unknown
AA seq
642 aa
AA seq
DB search
MLPPSLIYFVWFFGAVEAILNATESATQYILQNDDLYVAVNKSNGQVGKILLQGENLLGA
TGKGPYVDCSCVPSGFWGPGNPDTSSYRLITGSDASHTPYGGIVLNDNYGNQSIEQYWFL
REGETGIHTFTRVYYYNGTGLQTLGELRTLFRPNTDLWTHLYANQDNWAPRPTSEGVPAQ
DATGYVGNLTDMAYVQQYANFFTKYAFADQWRNHKVHGMYADGSTSKGNVTYGAWLVHNT
VETYYGGPLHSDIMVDGIVYNYIVSSHHGARTPNMTDGFDRTFGPQYHHFNKNGSLQELA
ADAAQYADPAWNADFYDELANHVPNYVVSSRRTTFEATISVPKTAREPIAVLAENHQDFQ
SNTIHGDSLQYWAEISSSGEIEIPRVKEGTYRLTIYADGVFGWFIQDDIRVSTSNKTVPH
FTWSEEEAGTEIWRIGTPDKSAGEFKHGKQPYKEKELQPDQFRMYWALWDFPSDFPDGVN
YKVGESVPEEDFNYIHWSVISQPGNFFRSEPYYDNVNNWTIRFDLAAESLARVETATFTV
QVAGAKTGSRNPEWVNLPYTLNVNGADVETYIIPWNVSTSCGVRSAVSCHNFAHKFVFPT
SILVQGENFFVLSLPFNASSVETAMLPWTTYIQYDALRLELE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaccatcactcatatattttgtctggttctttggcgcagttgaggccattctg
aatgcaacggagtcagcaactcaatatatccttcaaaacgatgatctttatgtagcagtc
aacaaaagcaacggccaagtcgggaagattcttctccaaggtgaaaatctcctcggagcg
acgggcaaaggcccttacgtggactgctcatgtgtaccaagtgggttctggggtcccggc
aacccagatacatcttcttatcgtctgattactggttctgacgcttctcatacaccctac
ggcggtattgttctcaatgacaattacggaaatcaatccatcgaacaatactggttcctt
cgagagggtgaaaccggcattcacacattcactcgagtatattactacaacggcacgggc
cttcagactctcggagagttgcgcactttattccggcccaacacggatctctggactcac
ttgtatgccaaccaagacaactgggcaccccggcccacttctgagggtgttccggctcaa
gatgcaacaggatacgttggaaacctgaccgatatggcctacgttcagcaatacgccaac
tttttcaccaaatatgcctttgcggatcaatggcgaaaccataaagtgcatggaatgtat
gcagacggatctaccagtaaagggaatgtcacctatggtgcatggctagtacataacact
gtggaaacgtactatggtggccccttgcactcggatataatggttgacggcatagtgtac
aattacatcgtgtccagtcatcatggagcgcgaacgccgaatatgacggatggatttgac
cgcacctttgggccacagtaccatcatttcaacaaaaatggttcactccaagaacttgcg
gcggacgctgcacaatatgcagatccggcctggaatgctgatttctatgatgaattagca
aatcacgtgcccaactatgtcgtcagttcacggcgtaccacctttgaggcgactatttct
gtgccaaagactgccagagagccgatagcagtgctagcagaaaaccatcaagactttcaa
agcaacactattcatggcgatagcttgcaatactgggcagagatttctagcagtggagag
attgagatacccagggtgaaggagggcacgtacagattaacaatctatgcggatggtgta
tttggatggtttatccaagacgacattcgagtgagcacctccaacaagaccgtgccgcat
ttcacctggagcgaggaagaagcagggacagaaatatggcgcatcggcactccagataag
tctgcgggggagttcaagcacggcaagcaaccatacaaggaaaaagagctgcagcctgat
cagttccgcatgtattgggccctctgggacttcccatccgactttcccgatggggtcaac
tataaagtgggagaaagcgttcccgaggaggacttcaactacattcattggagtgtcatt
tcacaaccgggcaactttttccgttctgagccgtactacgataatgtcaacaactggacg
attcgtttcgaccttgcggctgaaagcctggcacgggtggaaacggccacattcacagtg
caggtcgcgggcgccaaaacaggcagtaggaaccctgaatgggtcaacctaccatacacc
ctaaatgtcaacggcgccgacgttgagacgtacattatcccgtggaatgtcagcacctct
tgcggcgtcagaagcgctgtcagctgtcacaactttgcgcacaaatttgtctttcccacc
agcatacttgtccaaggtgaaaacttctttgttttgagccttccattcaacgcttccagt
gtggagacggctatgctaccatggaccacgtatattcaatacgatgcactacgactggag
cttgagtga
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