Pestalotiopsis fici: PFICI_02990
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Entry
PFICI_02990 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_02990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_02990
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PFICI_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
19268003
NCBI-ProteinID:
XP_007829762
UniProt:
W3XG05
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MASSNSLHLSSATFAKLSPHPFLLANLQPDDASSPSTRTNKRQPKQPRLPYINTSSLSHA
HGSAIVRTGDTTVICGVRGETLLTSAIPNYRAPDDSSGANVDEAKDYDLLVPNIELATGC
APNFLPGVPPTTLAQTLSTRVYSLLHNSKLIDVSQLRIYSNPEQTDRDQDGRPGEAMDAD
ETDEFASDERIVKAYWVLYIDVLFISFDGNPFDAAWAAILAALRDTTLPLAHWDADREMV
LCQQETSPLSLRGFPVATTAAIFTAKERQKKGGGKYWTLVDPDRLEESLCDETVTIVVDR
SNGDTKFLGISKSGGTIVGPELIRDLATVAESRWEDFRKATK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgtcaaactccttgcatctctccagcgcgacattcgcaaagctttcgccacac
ccttttctgctggccaacctccaacccgatgatgcctcgagcccttccactcgcacaaac
aaacgccagccaaagcagccccggttaccgtatatcaacacatcctcgctgtcccacgca
cacggcagcgccattgtgcgcaccggcgacaccacggtgatatgcggcgttcgcggtgag
actttgctcacctcggccattcctaactatcgcgctcccgacgattcgagcggcgccaat
gtagacgaggccaaggactacgacctgctcgtgcccaacattgagcttgctacaggatgc
gctcccaacttcctaccaggcgtgccaccgacgacgctcgcacagacgctgagcacgcga
gtctactctttattgcacaactcaaagcttatagacgtatcccaattacgcatctattcg
aaccctgaacagaccgatcgcgaccaagatggaaggcctggcgaggccatggacgctgat
gaaaccgacgaatttgcatcagacgaaagaatagtcaaggcgtactgggtgttgtacatt
gacgtcctcttcatttcgtttgacggcaacccctttgacgccgcctgggcggccatactt
gctgcactccgggacaccacactgcccctcgcgcactgggatgccgacagagaaatggtg
ttatgccaacaagagacctccccactgagcctgcgaggatttccggtggcgactactgca
gcaatctttacggcaaaggagagacagaagaagggcggcggcaagtattggacacttgtg
gacccggatagactcgaagaatccctgtgtgacgagaccgtgacgatagtcgtggaccgc
agcaacggcgacaccaagtttctgggaatctcaaagagcggcggcacaatcgtgggtccg
gagctgataagagacttggctacagtggccgagtcacggtgggaggacttccgaaaggct
acaaaataa
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