Pestalotiopsis fici: PFICI_03061
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Entry
PFICI_03061 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFICI_03061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfy03041
]
PFICI_03061
Spliceosome [BR:
pfy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PFICI_03061
Complex C
U4/U6.U5 tri-SnRNP related factors
PFICI_03061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
19268074
NCBI-ProteinID:
XP_007829833
UniProt:
W3XIF8
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MTHRADPSRFLDERHSAPLCPNGMNPATLLEKAMIERIIDSFYFKDACFGLNEADIVDRV
VSHVTFVGGTYGSSQKPTPFLCLLFKLLQLGPGDDVLGEYLSFGGERFKYLRALAAFYIR
LTRRSEDVYKTLEPFLEDRRKLRRKGAQGTTLTFVDQFVDDLLTKDRVCGTTLWQLTKRE
LLEDLEKLEPRVSPLGDIEDLLDELDQENGEEGQADSGENGASDEGEVEEVEPRSRSRSR
SRSRDSNRRRSYSGDRDDRMDVDERTKRRSSRSQSRSYPRSRSPDSRRDGSR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaccgcgccgacccctcgcgcttcctcgacgagcggcactcggcgccactatgc
cccaacggcatgaacccagcaacgctgctggaaaaggccatgattgagcgcataatcgac
agcttctactttaaagacgcgtgtttcggactcaacgaggccgacattgtggacagggta
gtgtcgcacgtcacctttgtgggcggcacgtacggctcctcgcagaaaccgacgccgttt
ctgtgtctgctgttcaagctgctgcagctcggccccggggacgatgtgctgggcgaatac
ttgagttttggtggcgagcgcttcaagtacctccgcgccctggctgccttttatatccgc
cttactcgtcgcagcgaggatgtgtacaagaccctcgagccattcctcgaggaccggagg
aagcttcgtcgcaagggcgcccagggaactaccctcacttttgtcgaccagtttgtcgac
gacctgctcaccaaggaccgggtctgcggtacgacattgtggcagctgaccaagagggag
ctgctggaagatttggaaaagttggagccgagagtcagtccgctaggtgatattgaagat
ctcttggacgagctggaccaggaaaatggggaagaggggcaagcagacagtggtgaaaat
ggagccagcgatgagggtgaggtggaagaggtagagcctcgcagcaggtcgagatctcgc
agcagaagcagagacagcaataggaggcggtcatacagtggcgacagggacgatcgaatg
gatgttgacgaacgcacaaaacgcagaagctccagatcacagtcaaggtcatatcctcgg
agtcgatcccctgattcgagacgagacggaagcagataa
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