Pestalotiopsis fici: PFICI_03838
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Entry
PFICI_03838 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PFICI_03838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_03838
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PFICI_03838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
TPR_14
TPR_19
NRDE-2
FemAB
Motif
Other DBs
NCBI-GeneID:
19268851
NCBI-ProteinID:
XP_007830610
UniProt:
W3XIC2
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MASDGFTDANAWGEDGGNGAAENLEQYSHEQQTQEPSTSAVSQFAPGESPEDDADSGEYD
PESVIISTTATPVSASAAVPPPTVSTSSPRPAKKPKKAGGFIVGSSDDEDDTPAPPQLSV
TLQPQAVNDATDAPAQSFTHPPQQQTIAPHEAEPPTQVSNGQASKQQMPADIISILEERV
KKDPRGDMDAWLALIQETRRQNVVQNSRSVYERFLQTFPQSAEIWVQYLEMELSLDNFAE
AENIFQRTLTTIVDVQLWTAYLDYVRRRNDLNDTTGVARQTVNAAYDFVLDNVGQDRESG
KIWQDYIQFLKIGPGQVGEGGWQDKQKVDGLRKAYQRAICIPISNLNVLWKEYDQFELGI
NKVAGRKFLQERSPSYMSARSANTQLDTITRGLRRSTIPRLPPAPGFEGDIEFGEQVEIW
KKWLSWEKSDPLVLRDDEPEVFKSRIIYVYKQALMALRFWPELWVEAAEWCFEHKIQTKD
GKDQGLQFLTEGVAANPESSLLALKHADHIESTHPAGEGDAGKLALSQAVRAPFEQALGT
LYPMVKDLKEREAAAVKAIENDSSLGPNDADDDDEGEVSSVKSFKEDIRKDRIKAVKDGF
AVQIQMLRQQISYLWIALARAFRRIQGQGKAVSRDAPTTGVRQIFTEARQRGQLTSDVYV
AIAHIEWDIYQDPVATKIFERGAKLFPEDENFIVAYLKHLHSRHDTTNARVVFSQTVKKF
KEKPELSRKLKPLYAYFHSYEAKFGELAQIKDLERQMAESFPEDPSLTHFAARFSSEGFN
PIAARVIISPSAQMRPKHIMQSVEHVPASIRGSPHPSALADRSPRPQFLQTVNSPKRPFQ
ADDNDDLNPPRKVARGVSPLKGAAGRRLDQQRRAAQGQGVPAHSNPVSISRDITFLLGLI
PPTHQYAAPRYRPDGIVRILRETGVPDFNDWKATNQGARHNRQVSTEFPPYAMPAGGRNS
PFLRGGGAGPPPQGELTPAFDTSAAMLGGQGANPPNFFPGGFPYNMGQQPGVPQYPPFRQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgacggcttcactgacgcgaatgcttggggggaggatggtggaaatggagct
gcggagaatcttgagcagtatagccatgaacaacaaacacaagaacctagtacttctgct
gtttcccaatttgctcctggtgaatctcctgaagacgatgccgattcgggtgaatatgac
ccagaatccgttatcataagcactacagctacaccagtttctgcttccgcagccgttcct
ccgccgactgtttccacatcctcgccgcgtccagctaagaagccgaagaaggctggtgga
ttcatagttggatcctcggatgatgaggatgatacccccgctcctcctcagctgtcagtc
acgctgcagccgcaggctgtaaatgatgccactgatgctcccgcgcaatcctttacgcac
ccgccccagcaacagaccattgcaccccatgaggctgagcctccgactcaagtgagtaac
ggacaggcaagtaaacaacagatgcctgcagacattatcagcatcttggaggaacgcgtc
aagaaggacccccgaggcgacatggacgcctggttggcactgattcaagagacacgaagg
caaaacgtagtgcagaactctcgatcagtttatgaaagattcttgcagacattcccgcaa
tcggctgagatttgggttcagtacctggagatggagctgagtcttgacaatttcgccgag
gcagagaacatctttcaacgcacgcttaccaccattgtcgatgtgcagctttggacagca
tatctcgactacgtgcgccgccgcaatgacctcaatgacaccactggagtagcgcgccag
actgtgaatgcagcttacgactttgtcctcgacaatgttggccaagatcgcgagtctggt
aaaatctggcaggactatattcagttccttaaaattggacctggccaggtcggcgaaggt
ggctggcaagataagcaaaaggttgatgggctgagaaaggcctaccagcgcgctatttgc
attccaatttccaacttgaacgtgctgtggaaggaatacgaccagttcgagctaggaatc
aacaaagtcgcgggccgtaaatttcttcaagagaggtcgccatcatacatgtcagcacgt
agcgcaaacactcagctggataccattacacgaggattgcgccgatccaccattccgcgt
ctgccacccgctcctggcttcgaaggcgacatcgagtttggcgaacaggtcgaaatctgg
aagaagtggctctcatgggagaaaagtgacccgctggtgctgagagacgatgagcccgag
gtgttcaagtctcgcattatatatgtctacaagcaagctttgatggccctccgcttctgg
ccagagctgtgggttgaagcagcagagtggtgttttgaacacaagatccagacaaaggat
ggcaaagaccaaggcctccagtttctcaccgagggagtcgctgcgaaccccgaaagctca
cttttggccctcaaacatgctgaccacattgagtcaacccacccagctggagagggcgat
gctgggaagctcgctttaagccaagctgtgcgtgcccctttcgagcaagcacttggtact
ctgtatccaatggtaaaggacttgaaggagagagaggcggcggctgtcaaggctatcgag
aatgattcgagtctcggaccgaatgatgctgacgatgatgatgagggtgaggtgtcgtcg
gtcaagtctttcaaggaagacatcaggaaggataggatcaaggcagtcaaggatggattt
gctgttcaaattcagatgctgagacaacaaatttcctatctttggattgcactggcccgc
gctttccgccgcattcaaggccaaggcaaagcggtctctcgagatgcacccactactggt
gtccggcaaatctttaccgaggcccgtcaacggggccagctcacgagcgacgtctatgtg
gcaattgcacacatcgagtgggacatctatcaagacccggtagctaccaagatctttgaa
cgtggcgcgaaactgttccccgaggatgagaactttattgttgcttacttgaagcatctg
cactctcgccacgacactaccaatgctcgtgttgtcttttcccagactgtcaaaaagttc
aaagaaaagcccgagctcagccgcaagctcaagcctctctatgcctatttccacagttac
gaagccaagtttggcgagttggctcaaatcaaagatttagagagacagatggcggagtct
tttcctgaagatcccagtctgacccattttgctgcacgcttttcctccgagggcttcaat
ccaattgctgcacgagtgattatctcgccttcggcccagatgcggcccaagcacatcatg
caatctgtagagcatgtgccagcctcgatacgtggaagcccacacccttctgctcttgca
gaccgaagcccaagaccgcaattcctgcaaacagtcaactcacccaaacgccctttccag
gctgacgataatgatgacctgaaccctccgcgaaaggtcgctcgaggggtctcgcccttg
aagggcgcggcaggacggcgactggatcagcagcgtagagcagctcaaggccagggagtt
cccgctcatagcaatcctgtctctatctctcgtgacattactttcctcctcggacttatc
cctcccacgcatcagtatgcggctccacgttacaggcccgatggtattgtgcggatcctt
agagagacaggcgttcccgatttcaacgattggaaagccacaaaccagggtgccaggcat
aatcgccaggtatcaacggaattcccgccgtacgcaatgccggcaggtggtcggaacagc
ccatttcttagaggaggaggagcaggcccccctcctcaaggtgaactgactcctgctttt
gataccagcgcagctatgcttggtggccagggcgcgaacccgccaaacttcttccccggc
gggtttccatacaacatgggacagcagccgggtgtgcctcagtatccgccattcaggcaa
ggttga
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