Pestalotiopsis fici: PFICI_04027
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Entry
PFICI_04027 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFICI_04027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_04027
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFICI_04027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
GPS2_interact
Motif
Other DBs
NCBI-GeneID:
19269040
NCBI-ProteinID:
XP_007830799
UniProt:
W3XKK9
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MTVIRRAPYKDFLQPCMQRRFASALLVLLALSYLESLTLSSWNSIIWSWFPIGIAGIRTI
FIFGSVLLVVILRIAHPHIGLRTSDSPFDTFTHNVFSLAAYETIVTYALSAFLFSQVYLG
SVADQSNLHWITYHSGDRARLNERTLFYTVSMILIGVAAGFLHLFFDVDRVLLGTVKETD
EKPKQEDPYEKLLSKGPSLVVRSVTISAIVATASYAGLYSWLFRYTAWGWAMFFLRPFYN
LPKTNIPPSGAPWSIWMLGRTIAAGTLLNVLWQFSNEAFTANFAKAPVKNGQPITSESKD
PNGSLLNGLKNKKARISSFAMWELALIARDFDVRRKAIFEDIDRKDGPMWSQVYKLCMDP
IKELEKRIDDYGKPPAAPASAPPPAQPQSRARVVEPPVSANVWQPAPPPKNLRDSVGKFV
AEVANSPGPKPSESLVPLAKKTAADVRDTLLSKQHQEQLSRQGLVGMLHSLLLMFPVNWR
WLFRHTHNRRVSTAVLGTPFGDVSLYVNSAFALSRLAVASLTEDNYGNVHRDVPTIIRTL
TTVIKKLEIFQDNFPAHWTDPDSVRQSASVQEVLDAFKDALARVITAFETYSSDLKLTRT
DLRLAQEAAQKPEQAQQVEKQVEKQPAMQQVL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcattcgaagagctccatacaaggacttcttgcagccttgcatgcaaagaaga
tttgcatcagcgctgcttgtcctgctcgccctttcatatctcgagtctctcactctgtcc
agctggaactcgatcatttggtcttggtttcccattggtatcgctggcatccgtaccatc
ttcatctttggaagtgttctcttggttgtcatcctccgcattgcacaccctcatatcgga
ctacgcacaagcgactcacccttcgacacttttacgcacaatgttttctcccttgcagca
tacgagacgatcgtgacatatgccctctcggcctttctcttcagccaggtctacttgggc
tctgtcgcggatcaatccaacttgcactggattacataccatagcggcgaccgggcacgg
ctcaatgaacgaactcttttctataccgtgtcgatgattttgattggcgtggcagctggc
ttcctgcatttgttctttgatgttgatcgtgtcctcttgggaacggtcaaggaaacagat
gagaaaccgaagcaggaggatccatatgagaaactactctccaagggaccgagtctggtc
gtacgatccgtcaccatctcggccatcgtcgctacagccagttacgcgggcctatactcg
tggttgtttcgatacacagcctggggatgggccatgttcttccttcgtcccttctataac
ctgcccaagaccaatattccgccctccggcgcgccatggagcatctggatgctgggaaga
acaatcgcagctggcactctgttgaatgtgctctggcaattcagcaacgaggcattcact
gccaatttcgcaaaggcgcccgtcaagaatggccaacctatcacatccgaatccaaggac
cccaatggcagtctgcttaatgggctgaagaataagaaggcgagaatttcgtcttttgcc
atgtgggaactggccttgattgcacgagactttgacgttcgccgcaaggccatctttgag
gatatcgatcggaaagatggtcctatgtggtctcaagtctacaagctctgcatggacccc
atcaaggaactagagaagcggatcgacgattatggcaaaccacccgctgctcctgcctct
gcaccaccacctgcccagccgcaatcccgagcgcgcgttgtcgaaccacctgttagtgcc
aatgtctggcagcccgcgcccccaccaaaaaacctgcgtgactctgtgggcaagtttgtg
gcagaggtggccaactcgcctggccccaagccttcagaaagtttggttcccttagcaaag
aagacagctgctgatgtccgagatacgcttctatcaaagcaacaccaggaacagctcagc
cgccagggccttgttggcatgctgcactcgcttctgttgatgtttccagtcaattggaga
tggctcttcagacatacacacaatagacgtgtcagtactgctgtcctaggtacgccattt
ggagatgtcagcctctacgtcaattctgcctttgcactctcaagactggccgtggctagt
ttgacggaggataattatggaaatgttcatcgtgatgttcccactattataaggaccttg
actacggtcatcaaaaagttggagattttccaggacaacttcccagcccactggaccgat
cccgacagtgtacgacaatctgctagcgtccaggaagtcctcgatgccttcaaggatgct
ctggctagagtcattaccgcctttgaaacgtacagctcagatttgaagctgacgaggacc
gacttgcggcttgcacaagaggcagcgcaaaagccggaacaggctcaacaagttgagaag
caagttgagaagcagccagcgatgcagcaggtcctttag
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