Pestalotiopsis fici: PFICI_04198
Help
Entry
PFICI_04198 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PFICI_04198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_04198
Enzymes [BR:
pfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
PFICI_04198
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PFICI_04198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_24
KTI12
FeoB_N
MMR_HSR1
nSTAND3
ATP_bind_1
SRPRB
AAA
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
19269211
NCBI-ProteinID:
XP_007830970
UniProt:
W3XA98
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MSIPGLGFISAAASSNTIAAPAASTTSASASTLANISLQPFWEYRFQVPFSSSLNIRLVS
GLAEKEGTELAPNVTYTFSGTKSKINTWQGCELEVSTENAGSYDAHVAELTAEDTPLVSY
LNLHMKLQGLRAATVAGKSSDAMGPRVLVVGPPNSGKTSLVKMLTGWATRMGKQPLVINT
DASQGMLSMPGTLTAAVFATLMDMTTDWGGTPSSGPAGIPVKLPLTYYYGFERPRGNPKL
FRGLLSRLAAASTNRLSEDPEVRSSGMLIDTGAVDASEPNYDMISHIAAEFSVNVIVSLG
SERIAGDLAKVFGGQKNSLGEDVIVVGLEKSGGIVERDPSYMQQHREKVIKEYFFGDLKR
TLSPATQNIGFEGISLWKVVEADQNAGTEDFYDPLASTSTLEKVEPSLMMLNCTLAIMYA
SPRDHPDAIRDANVMGFVYITDVDEKKKRLKVLSPVNARLGDRPLVWGNWPEPMVSLLG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattccaggtctgggtttcatttctgcggcggcaagtagcaacacaattgcagcg
ccagcagcttccaccacttcagcctcggcatcgacattggccaacatttctctccagcca
ttttgggagtatcgattccaagtcccattctcgtcctcgctcaacatacgtctggtatcg
gggcttgccgaaaaggagggtaccgagctcgcacccaatgtgacgtatacgttttcgggc
accaaatccaagatcaacacatggcaaggctgcgaactcgaggtcagcaccgagaatgcg
ggttcttacgacgcccatgtcgccgagctcacagctgaagacacaccacttgtttcctac
ctcaatctccacatgaagctccagggattgcgggcagcgacggtcgcgggaaagagcagt
gatgccatgggcccacgagttctagtggtcggaccgcccaacagcggcaagacgagtttg
gtcaagatgcttacaggatgggcgacacgcatgggcaagcaacctcttgtcatcaacact
gatgcatctcaggggatgctcagcatgccaggcacattgactgctgccgtctttgcgaca
ttgatggacatgaccaccgactggggcggaacacccagctcgggtccagcagggatacct
gtcaagcttccgctgacctattactatggtttcgaaaggcctcggggcaatcccaagcta
ttcagaggcctgctcagtcgactcgcggccgcatccacaaaccgtctatcagaggatcca
gaggttaggagttctggcatgctcattgatacgggagctgtcgatgcctcggaaccaaat
tacgacatgatttcgcatattgccgcggaattctcggtaaatgtaatcgtctcgctcggc
tcagagcgtattgctggcgatttggccaaggtttttggcggccaaaaaaacagtcttggc
gaagacgtgattgtcgttggcctggaaaagagtggcggcattgtcgagcgggacccaagt
tatatgcagcaacacagggaaaaggtcatcaaggagtacttttttggagatttgaaaaga
accttgagtcctgcaacccaaaatattggattcgagggtatatcattgtggaaggttgtc
gaagccgaccaaaacgcgggaaccgaggacttttacgatcctcttgcatcgacatctaca
cttgaaaaggtggaaccttctttgatgatgctcaactgcaccctggccatcatgtacgca
agtccacgcgaccacccagacgccatccgcgatgccaatgtcatgggtttcgtgtatatc
acagatgtcgacgaaaagaagaagcgtctcaaggtcttgtctcctgtcaatgcaagactc
ggtgatcggccgttggtatggggaaattggccagaaccaatggtgagtttgctgggttga
DBGET
integrated database retrieval system
