Pestalotiopsis fici: PFICI_04408
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Entry
PFICI_04408 CDS
T04924
Name
(RefSeq) Ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03010
Ribosome
pfy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PFICI_04408
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PFICI_04408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pfy03011
]
PFICI_04408
04121 Ubiquitin system [BR:
pfy04121
]
PFICI_04408
Ribosome [BR:
pfy03011
]
Ribosomal proteins
Eukaryotes
Large subunit
PFICI_04408
Archaea
PFICI_04408
Ubiquitin system [BR:
pfy04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
PFICI_04408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Plexin_RBD
DUF2604
UBL_UBAC1
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
19269421
NCBI-ProteinID:
XP_007831180
UniProt:
W3XAR8
LinkDB
All DBs
Position
Unknown
AA seq
130 aa
AA seq
DB search
MPLQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD
YNIQKESTLHLVLRLRGGIIEPSLKALASKFNCEKMICRKCYARLPPRATNCRKKKCGHT
NQLRPKKKLK
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcagatcttcgtgaagaccctgacgggcaagaccatcacccttgaggtggag
tcttccgacaccattgacaacgtcaagtccaagatccaggacaaggagggcatccccccg
gaccagcagcgattgatctttgctggtaagcagctcgaggatggccgcaccctgagcgac
tacaacatccagaaggagtcgactctgcacctggtcctccgtctccgtggtggtatcatt
gagccctcgctcaaggctcttgcctccaagttcaactgcgagaagatgatctgccgcaag
tgctacgctcgtctgcccccgcgtgccaccaactgccgcaagaagaagtgcggtcacacc
aaccagctccgacccaagaagaagctcaaatag
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