Pestalotiopsis fici: PFICI_04457
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Entry
PFICI_04457 CDS
T04924
Name
(RefSeq) Rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PFICI_04457
Enzymes [BR:
pfy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
PFICI_04457
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Paralog
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Motif
Pfam:
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
19269470
NCBI-ProteinID:
XP_007831229
UniProt:
W3XBL9
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All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MRSLLLSAALAPAAVLAALNATETSSELIIANSRLYASVNKSTGSVETLTLDGQNLLGTK
SGSTGVGPYLDCYCIPSGFWTPGSASPIYELYNGTDSTGTQYGGIKMSDTYPGTGQVLET
YWFLRDGETGLHMFERLAYYNETTPFLRNLQEFRTLFRPNSAIWTHLLTNEEQWAPLPSK
EAIANEVVVQDATWYLGNTPNDAYVQQEADYFTKYTFSDTWRNNDVHGQFADGTQTSDNS
TYGSWLVMNTKDTYFGGPLHSDLMVDGIVYNYIVSNHHGDQTHYYYFNHLPAGTTILESH
ADALQYANASWNAEFYDSIAQYVPNYVPSSERGSFKVEVSLPDNAANAIAVLAQNAIDFQ
DNVFDVDAYQYWAEIDAASGTATIPRVKAGTYRLTIYAEGVFGDFVQDDVVVTAGEEQSV
SVAWTEDADGTEVFRIGTPDKSSGEYRHGYARDATHPRHPEEYRIYWPVYDFVDEFPEGV
TYKVGEGNVSTDLNYVHWSVFGGYGNSIRTEPYAGDGNVNNWTIAFDFDQSQYPDATEGT
FTVLLAGAKTAAGNTDVYNASEPHANLKYTVNVNGQDLEPWVIPYYQSSSCAVRSAVICY
NVGHKFKFPSDLLVTGENTFILSLPYNATDYESAVLTTTVYVQYDALRLELS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtctcttgttatctgcggcccttgcgccggctgccgtgttggcggcactcaac
gcaaccgaaacctcgtccgagttgatcattgccaacagtcgtctctacgcgagcgtgaac
aagtcgaccggttccgtcgagaccttgactctggatgggcagaatttactcggaaccaag
tctggttcaaccggtgtcggcccgtatctggactgctactgtataccctctggtttctgg
actcccggcagcgcatcacccatctacgagctttacaatggtacagactcgaccggcacg
cagtatggaggtatcaaaatgtcggatacatatccaggaaccggccaggtactggagact
tattggttcctcagagatggggagactggcttgcacatgtttgagaggttggcatactac
aatgagaccacgccatttctgaggaatctacaagagttccggacactgttccgacccaat
tcggcaatctggacacacctgctcacaaacgaggagcaatgggcgccgctgcccagtaag
gaggccatcgccaatgaagtggttgttcaggacgcaacatggtatctcggcaacacacca
aatgatgcctatgtacaacaagaagccgactatttcacaaagtacacattctcggatacg
tggaggaacaatgatgtccatggccagttcgccgatggaacgcagacttcggacaactcg
acgtacggctcttggctcgtcatgaataccaaggacacctatttcggtgggcccttgcat
tctgacttgatggtggatggtatcgtgtacaattatattgtctcgaatcatcatggtgac
caaacgcattactactacttcaaccatctccccgctggcactaccattctcgaatcccac
gccgatgctctacagtatgcaaacgcgtcatggaatgccgaattttacgactcaatcgcc
cagtacgtccccaactatgtgccatccagcgagcgcggctctttcaaggtagaggtatcc
ctccccgacaatgccgccaacgccattgcggtgctcgcccaaaacgccattgacttccag
gacaatgtctttgacgtcgacgcctaccagtactgggccgagattgacgccgccagcggc
accgccaccatcccgcgggtcaaggccgggacgtaccggctcaccatttacgccgagggc
gtgtttggcgatttcgtacaggacgacgtcgtggtcacggccggagaggagcagagcgtc
agcgtggcgtggaccgaggacgccgacgggaccgaggtcttccgcatcggcacgcccgac
aagagctcgggcgagtaccgccacggctacgcgcgcgacgccacgcacccgcggcacccc
gaggagtaccgcatctactggcccgtgtacgactttgtcgacgagttccccgagggcgtg
acgtacaaggtgggcgagggcaacgtctcgaccgacctcaactatgtccactggagcgtg
tttggcggctacggcaactcgatccgcaccgagccctatgccggcgacggcaacgtcaat
aactggaccattgcctttgactttgaccagtcgcagtatccggacgcgaccgagggcacc
tttaccgtcctcttggccggtgccaagactgctgccggtaacaccgacgtctacaatgcc
tcggagccacatgccaatctcaagtataccgtcaatgtcaacgggcaagacttggaaccc
tgggtgattccgtactatcaaagcagctcatgtgccgtacggtccgccgtcatttgttac
aatgtcggacacaagttcaagtttccgagtgaccttctcgtgacgggagagaacacattc
atcctgagtctcccctacaatgccacagattatgagagcgcagtcttgactacgaccgtt
tacgtccagtatgatgcgttgcgcttagaactcagctag
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