Pestalotiopsis fici: PFICI_04796
Help
Entry
PFICI_04796 CDS
T04924
Name
(RefSeq) ATP-dependent RNA helicase dbp-4
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_04796
Enzymes [BR:
pfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFICI_04796
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
90S particles
Helicases
PFICI_04796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
19269809
NCBI-ProteinID:
XP_007831568
UniProt:
W3XA33
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MPARTSGHAPNGKRKVKTEDKSLKRKRNQDDLQQLKKAVDEFDPKATEITKFTDLPLSSP
TRSGLDASHFQTLTDIQAKAIGPALKGRDILGAAKTGSGKTLAFMVPVLEALFRAQWTEH
DGLGALVISPTRELAVQSFEVLRKIGRHHTFSAGLVIGGKSLREEADRLGRMNILVCTPG
RMLQHLDQTAGFNVDNLQILVLDEADRIMDMGFQSAVDALVEHLPKSRQTVLFSATQSRK
VSDLARLSLKDPEYISVHEASTSATPSTLSQHYLITPLPEKLDTLYSFIKSNLKSKIIVF
MSSGKQVRFVYESFRHLQPGIPLLHLHGRQKQVARMEITRRFTSAQYSCLLATDVVARGV
DFPSVDWVVQMDAPEDADTYIHRVGRTARYERDGKAILFLDPSEEEGMLKRLEQKKVTVQ
KVNVRDKKKKQITNSIQDMCFHNPDLKYLGQKAFISYTRSVGLQKDKDIFDLRALDLEGY
SASLGLPEMPRVKYQKPEDVKKLKNRSRAELSSGSEYDSDGEKIAKSKKKDEVRTKYDKM
FERKNQDVLSEHYSKLRNDVEEDDDFFGVKRVLKDDDLDSAAKDEDVRGKVVPVYGGQEL
VIDSKRREKLITSKKQMLKYKGKGTRVVFDDDGEAHQLYELQGEDDFKREGSAEAQRRAF
VDAETDRVREADVDDKQLAKEKRQEKKIKRKERERLENSGQDMPGKDQPALGTSEDAEQA
MDFLRSLPIREDAGGSDGEDERPKKKAKKWFQDDSDDEAEKSNKKGKGKVIEVTDAPNTL
EDYEALAQGLLD
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctagaacctcgggtcatgcgccgaatggcaaaaggaaggtcaagaccgaagac
aagtctcttaaacggaagcgcaaccaggacgatctgcaacaactgaagaaggcagttgac
gagttcgacccaaaggcgacagagatcaccaaattcaccgacctaccgctctcatcacct
actcgctccggtctcgatgcatcgcactttcagaccctcaccgatatccaggccaaggcc
atcggaccagctctcaagggtcgtgacattctcggcgccgcaaagacaggatccggcaag
actttggcattcatggtgccagtgctagaggccctcttccgcgcacaatggactgagcat
gacgggctgggtgccctcgtcatctcgccgacccgagagttggcagtacaaagtttcgag
gtgctgcgcaagattggtcgacaccacacattctcggccggtctggtgataggaggaaag
agcttgcgcgaagaggcggaccgattgggccgcatgaacatcttggtgtgcacaccgggc
cgtatgctccagcacctggatcagaccgctggctttaatgttgacaacttacaaatactt
gttctggacgaagccgaccgaatcatggatatgggattccagagcgccgtcgacgccctt
gtagagcatctcccaaagtcgaggcagacagtcttgttcagcgcaacgcagagcagaaag
gtctctgacttggctagactgtcgctcaaggaccccgaatacatctctgtccacgaagca
tcaacctccgcgaccccgagcacactgtcacaacattatctcatcacacctctacccgaa
aagctggatacactgtattcatttatcaaatcgaatctcaagagcaagatcatcgtgttc
atgtcgtcaggaaagcaagtacgatttgtctacgagtcgttcagacatttacagccgggt
attcccctgctccacctgcacggtcgccagaagcaagttgcgcgcatggaaatcacgagg
cgttttacatcagctcaatattcttgtttactggctacggacgttgtcgcccgtggagtc
gactttccctctgtcgactgggtcgtgcagatggacgcccccgaggatgccgatacctat
attcacagagtaggtcgaaccgcacgatatgaaagagacggcaaggccattctattcctt
gaccccagcgaggaggaaggcatgttgaagaggctcgagcaaaagaaggttacagttcaa
aaggtcaatgtccgcgataagaagaagaaacagatcaccaacagcatacaagacatgtgc
ttccacaacccagacttgaaatacttgggacaaaaagcattcatcagttatacacgctcg
gtcggactacaaaaggacaaggacattttcgaccttagggcattggacctggagggatat
tcggcaagcttgggtctgcccgagatgccacgggtcaagtatcagaagcccgaagatgtc
aagaagctcaagaacaggtcacgggccgagctctcgagcggttccgaatacgactctgac
ggcgagaagattgccaaatccaagaagaaggacgaggtgcgcacgaaatacgacaagatg
tttgaacgcaagaatcaagacgtgctgtccgagcactactcgaaactccgcaacgacgtg
gaggaggacgacgacttctttggcgtcaagcgggtactcaaggatgacgacctcgactcg
gcagccaaggacgaagacgtgcgaggcaaggtggtccccgtgtacggtggccaggagctg
gtcatcgactcgaagcgcagggaaaagctcatcacgtccaagaagcagatgctcaagtac
aagggcaaaggtacgagggttgtgttcgacgacgacggcgaggcccaccagttatacgag
ctccagggcgaggacgacttcaagcgggagggctcggccgaggcgcagcggagggcgttt
gtggatgccgagaccgaccgtgtacgcgaggccgacgtggacgacaaacagctcgccaag
gagaagcggcaagaaaagaagatcaagcgcaaggagagggaaagactggagaactctggc
caggacatgccgggcaaggatcagcctgccctgggcacgtccgaggacgcagaacaggcc
atggactttttgcggtcgctgcccattcgcgaagacgccggcggaagcgacggcgaggac
gagcgaccaaagaagaaggccaagaagtggttccaagacgactcggacgacgaggccgag
aagagcaacaagaagggcaagggcaaggtcatcgaggtcacggatgcaccaaatactctg
gaggactacgaggcattggcgcagggtctgctggattaa
DBGET
integrated database retrieval system
