Pestalotiopsis fici: PFICI_04895
Help
Entry
PFICI_04895 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03420
Nucleotide excision repair
pfy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PFICI_04895
09124 Replication and repair
03420 Nucleotide excision repair
PFICI_04895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfy04121
]
PFICI_04895
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_04895
Ubiquitin system [BR:
pfy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
PFICI_04895
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
PFICI_04895
TCR (transcription coupled repair) factors
Cul4-CSA complex
PFICI_04895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
WDR55
Motif
Other DBs
NCBI-GeneID:
19269908
NCBI-ProteinID:
XP_007831667
UniProt:
W3XAG2
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MAYLAPIHRPNSVRHAVRAQLFPGEGDCLVMAKANRLEFWKLNDERNMLVQFDTKVVFGA
ISILQKISPKDADLDLLFVGTDRFQYFTLGWNPDTESLDTISSFHDMHERHMRDSQSQDK
CITDPTGQYMVVLVWEGVLNILRLGNRKNSRTEVQWQDQCRITELFIKSATFLHVETGKP
KVAFLYQTRTDIPDAQLVTYNLYSDEKNTQASRFEARDQVDKFAMQDPGAAMLIPVGRGE
QDHKRYIIRNAAQARAQLGGFIVVGETRLLYYDDAAKKTVEAALSEASIFVAWAEYDVSH
YFVADDYGTMWLLEIVLDGGAVVELKMKKIGTTSRANVLIYMGSDILFVGSHYGDSQVFK
VDTQSWTLHQIQVLPNISPVLDFTVMDMGNRDGEDQNTNEYSSGQARIVTGSGVYKDGSL
RSVRSGVGLEDIGILAQMEAIQAVFPLRSQPSAKVDTLLVSSLLETRVFIFEPSGEIEEV
DSFKGLSLGEQTLVVLNLANNRLLQVTSTAVHLLDLEDNVVVSTWQPQGGDKITAASANE
NWVLLSIEGKNLVSLGIQHELVLGQHNEPADEDQIACIHLPPQYPHLGVVGFWKSGKVSI
VDMVSLQPLHSESSRRNDDTTSIPRDLAMGQIVPPALGGPTLFVAMEDGLVITFNVSPTD
FSLSSRRSSVLGTQHARLQLLLLEDGICNVFATSEHPSLIYASDGRIIYSAVTAEDAICV
CSFDSEAFPDSIVVATQNELRISVLDRERRTHVQSLPVGKTVRRIAYSRNERVFALGCIS
REVINNEEIVESSIRLVDEVIFDKVGQDFILNTSSGLEMVEAVIRAELPDSYGNRAERFI
VGTSFPTDAQVGASSRDNIKGRILIFGIDSERNLYQISSRNLKGACRCLGTIGDHVVAGL
AKTIVVYRYNESTSSTAQLDRVASYRPSTYPVDIAIEGNIIAVADLMKSVTLIEFAPEAG
ELKEIARHHHAAWATAVSHVEGNSWLEADANGNLMILSPNAQGATDEDKKRMDITSEMNL
GEMVNRIQKVKVASSDTAIVVPRAFLATVEGGVYFFGTISPQYQDLLIRFQTSLVRTITS
VGDINFDPYRSFRNEQREGAGPFRFIDGELIERFTDLEDQVQEEICKGLGPDVETMRNLV
EDLKRLH
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcctacctagcgcccatccatcggccgaacagcgttcgccatgctgttcgtgctcag
ctctttccaggtgagggcgattgcctggtcatggcaaaggcaaaccgcctagagttttgg
aagctcaatgacgaacgcaacatgttggttcaattcgacacaaaggttgtctttggcgca
atctctatcctgcaaaagatcagcccaaaggatgccgacctggaccttttgtttgtcggc
acagatcggtttcagtacttcaccttgggctggaacccagacaccgagtcactcgacacc
attagttctttccacgacatgcacgagcggcacatgcgcgactcacagagtcaagacaag
tgtatcacggatccaacaggccaatacatggtggttctcgtctgggagggtgtactcaac
attctccgtttgggcaacaggaagaattcgaggactgaggtccagtggcaggatcaatgt
cgcatcaccgagctcttcatcaagtcggccaccttcctacatgtcgagaccggaaagccc
aaggtagcctttctctaccagacccgcacagatattcctgatgctcaactggtcacttac
aacctatactctgatgagaagaatacccaggcctcacgctttgaggcgagagaccaagtg
gacaagtttgccatgcaggatcctggtgctgcaatgctcattcctgtaggccgcggagaa
caagatcataagcggtacatcattcgtaatgctgcccaagcacgggctcaactcggcggt
ttcattgtcgttggcgaaacaagactcctatactatgacgacgcagcaaagaagactgtc
gaagccgctctttccgaagcctccatcttcgttgcatgggccgagtatgacgtctctcac
tattttgttgctgacgactatggcaccatgtggctgctcgagattgtgcttgacggaggc
gccgtcgtcgaattgaagatgaaaaagattggaactacatcccgagccaatgttcttatc
tacatgggaagcgatattctgtttgtggggtcgcattatggtgattcgcaggtcttcaag
gtcgacacacagagctggacactccatcaaatccaagtgttacccaatataagccctgtg
ttggactttaccgtcatggacatgggtaatagagatggtgaagaccagaacacgaacgag
tattcctctgggcaagctagaatcgtcacgggcagtggcgtctacaaggatggcagtcta
cgcagtgttcgcagtggggtcggcttggaggatatcggcattttagctcagatggaagct
attcaagcagtctttcccctccgatcacaaccttccgccaaggttgacaccctattagtg
tcctcgcttttagaaaccagagtgtttatctttgagccgagtggtgagatcgaagaggtt
gattctttcaagggcttgtctctgggcgaacagactcttgtagtattgaaccttgcgaac
aaccgccttttgcaggtgacctcgacagctgtccacctacttgaccttgaggacaacgtc
gttgtttcaacttggcaaccccaaggcggcgacaagattaccgctgcctctgccaacgag
aattgggtattgctctctatagaaggcaagaatcttgtgtctctcggtatacagcatgag
ctggtcctcggtcaacataacgaaccggcagatgaggaccagattgcctgcatacacctt
cctcctcagtatccgcatcttggtgtggtgggattctggaagtctggcaaggtatcgatt
gttgacatggtgtctcttcaaccgcttcatagcgagtcgtcacgacgcaatgatgatact
acgtcgatcccccgagatttggccatgggtcaaattgtaccgcctgcattgggcggtccg
accttgttcgttgctatggaggacggtttggtcatcacctttaatgtctctccgacagac
ttttctctgtcctcccgcaggagtagcgtccttggaacccaacatgcaagattgcagctg
ctacttctcgaagatggtatttgcaacgttttcgctactagtgaacatcccagcttgatc
tatgctagtgatggtcgaattatatactccgcggtgacagctgaggacgccatctgtgtc
tgctcatttgattcagaggctttcccggattcaatcgtggtggcaacccaaaatgagctt
aggatctctgttctcgaccgcgaacgccgaacacatgtccagagcctacccgtcggcaag
acggtcaggagaattgcttattcacgcaatgagcgagtttttgctctgggctgcatcagc
agagaggtgatcaataatgaagagattgtcgagagttcaattagacttgtcgacgaggtc
atatttgataaagttggtcaggactttatcctaaacacttcatccggcctggaaatggtt
gaagccgtcatccgagctgagcttcctgattcgtatggtaatcgcgcagaaagatttatt
gttggaaccagttttccgacagatgcgcaggtcggtgccagttctcgagataatattaaa
ggccgaatcttgatcttcggaatcgatagtgagcgcaacctctatcagatctcctcgcgc
aacctcaagggcgcatgccgatgcctcggcaccattggcgaccatgtcgtagccggattg
gccaagacaattgtagtctaccgctataacgagtccacgtcctcaactgcccagttggac
cgtgtggcttcgtaccgcccttccacttaccccgtcgatattgctatcgaaggaaacatc
attgcagtggctgacctcatgaagtcggttacgcttattgagtttgcgcccgaggctgga
gagctcaaggagattgccagacaccatcatgcagcttgggccaccgcagtcagtcatgtc
gaggggaattcgtggctcgaggcagatgctaatggcaacctgatgatactgagtccgaac
gctcaaggtgcaactgacgaagacaagaagcgtatggacataacgagtgagatgaacctt
ggggagatggtcaacagaattcaaaaggtcaaggtcgcatcgagcgacactgcaattgtc
gttcctcgggccttcctggctacggttgagggcggagtctactttttcggcaccatctcg
ccgcaataccaggatttattgatccgattccagaccagtcttgtccgaaccatcacatca
gtcggcgacatcaactttgacccttaccgttcgttccgtaacgagcagcgtgaaggcgcc
gggcctttccgctttatcgacggtgagctcattgagcgtttcacggacctcgaagatcaa
gtacaagaggaaatctgcaagggtttgggtcccgacgttgaaacaatgagaaatcttgtt
gaagatttgaagaggttgcattag
DBGET
integrated database retrieval system
