Pestalotiopsis fici: PFICI_05018
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Entry
PFICI_05018 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03013
Nucleocytoplasmic transport
pfy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFICI_05018
03015 mRNA surveillance pathway
PFICI_05018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_05018
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PFICI_05018
mRNA cycle factors
P-body specific factors
PFICI_05018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
CBP4
Motif
Other DBs
NCBI-GeneID:
19270031
NCBI-ProteinID:
XP_007831790
UniProt:
W3XCH0
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MDRPRRRELRSLNERAWDGDTGVFPVGKSLDSSLKKNTAFIKRLRTAISSATLNTFLQEI
KTLSLTKYLSEIISACYEGLCRLKSPGEIDAGVEIVSALHQRFGPADFTEYLGWLLGKGM
ATPDKSLLKALAPEVREKEEKERLVRQRALLRVVTELWLLGVLRTLDDVKPDGTAAGKET
GLKTKAPGSTKVGTTEPFPLEVLKDLLGHDREHTNLPLLVIFVKTFSWDILGAKSSAGEG
RKTVEEDGVTRTEEAPLAIDGSDGAADSTDDPPITSPELRERFRNILKRYFDDVTAHILR
DQKHIAAQKGRNSEAYVKSGEVFEDRQANFERLLKAQERLVSNAQVVAEAIGAEMPDLKD
AGDALGASNGSIGLVKTGDYLRGQSDGAGIWEDDEERRFYENLVDLKGKVPGILLEDGKK
KKSDTDEQVGKKADMNDVQDAPKPAEGADDQSTAIANKTIGAQVDALLTRLPELTNKDAV
DDTAIDFCFLNSKASRNRLIKALTEVPKGRTDLLPFWARLIATLGRYMPDIPKGVVEYLD
AEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEIIC
NLLENCGRYLLRSAETSPRMATFLETLQRKKSVQHIGQQERMLIENAVYYVDPPERSAIQ
QKERTPTELFIRKLVYVDMTKRNYTKILKQIRRLHWEEPDVVAILAKVFSKPGKVKYGSI
HILAILLSAVYRYHPGFVLRVIDNVLDSVMLGLEHNDFKYNQKRIAEIKYLSELYNYRML
EHPVIFDTLYKITTFGHGGAPLPGRMNPFDLPDDYFRIRLVATVLETCGMYFSKGPAGKK
LDYFLSFLQYYIYTKAPLPMDIEFIVQDVYSLTRPQWKLATSLEEASKAFQLAIAQDQKN
AGVDGAADPDPEAEDDAESVASSDDEGDGDGIMPEADGEEDANSDDDEGHELDDKSSGDS
ESEEEEEIVVTRETGTIDPEEEADFEREYAKMMAESLESRKFDRKPLFDVPLPMRSSKTR
EAPKTQEVENPANMMAFSLLTKKGNRQQTRTVELPSDSTFAVAMKTQQQAEREEQQRIKN
LVLNYDLRESEDPDGDTTTTPLIKNSNIHNRMKAGPEKTTTYHINRPEKQGKDRGGQRVR
RLEMNDLDWYGNTRDNNQQAASHVEPSTRVEASGEIGFPSKRRERVPGSQARYRKQAYAG
QRARAAS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcccaagaagacgcgagttgcgctcgctcaatgagcgcgcatgggatggcgac
acaggcgtctttccggttggaaagtctctcgactcgtctctcaagaagaataccgctttt
atcaaacgactgcgaactgcaatctcctcagccaccttgaacacattcctgcaggagatc
aagactctcagtttgaccaagtacctctccgaaattatctcggcatgctacgaaggacta
tgcaggctcaaaagcccaggcgaaatcgacgctggagtagaaattgtcagcgcgttgcac
cagcgattcggcccggccgacttcaccgagtatctgggctggttgctgggcaagggcatg
gctacacccgacaagagtttgctcaaagctctggcgcccgaggttcgcgaaaaggaagag
aaggagcgcctggtccgccaacgggcacttttacgtgtggtcaccgaattatggctcctc
ggcgtgctcagaacacttgatgatgtcaagcctgatggaactgctgccggcaaggagacg
ggcctgaaaaccaaagcgcctggctcgacaaaggttggtactacggaaccattcccactc
gaggtcctcaaggacttgctgggccacgatcgagagcatacgaatctacctcttcttgtg
atctttgtcaagacgttcagctgggatattctcggtgccaagtcctcagcaggagaggga
cgaaagactgttgaagaagatggtgtcactcgaaccgaggaagcccccttggccattgac
gggagtgacggcgctgccgacagcactgacgatcccccgattacctctcccgagctccga
gaacgatttcgcaacatcctcaagcggtactttgacgatgtcacggcccatattcttcgt
gaccaaaaacacattgctgcccaaaaaggccgaaactccgaggcttatgtcaagtctggc
gaggtttttgaagatcgccaagccaatttcgaacgcctgctcaaagcccaggagcgtctt
gtcagcaacgctcaggttgtcgctgaagctatcggtgctgaaatgcctgatctgaaggat
gctggtgacgctctaggtgcgtcaaatggctccattggtctggtgaaaactggcgactac
ctccgcggacaaagcgacggggccggcatctgggaggacgatgaggaacggcgcttctat
gaaaacctcgtcgatttaaaaggcaaggtacctggcattctccttgaggatggaaagaag
aaaaagtccgataccgacgagcaagttggaaagaaagcggatatgaatgacgttcaggat
gcgcccaagcccgctgaaggtgccgatgatcagtctacagccattgccaataagactatt
ggagcacaagtcgacgctctgctgacacgtcttcccgagcttaccaacaaggacgcggtt
gacgatactgctattgacttttgcttcttgaattcaaaggcatcccgaaaccgtttgatc
aaggccttgaccgaggtacccaaaggacgaaccgatttgcttccattctgggcgcggctg
atagctacactcggccgatatatgcctgatatacccaagggcgtggtcgagtatctggac
gcggagttccgaagtctccaacggcgcaaggagaaagacttccttggacaggtccgactg
agcaatatccgctaccttgcggaattgaccaagttcggcatcgttccagaacatgtggta
ttccactgcctgaaagtgagcctggacgatttttcccggatgaatatcgagattatttgc
aatttgctcgaaaattgtggtcgctacctactgcgcagcgctgagacctctcctcggatg
gcgacattcttggaaaccctccagcgcaagaagtccgtgcagcatataggacagcaggaa
cgcatgctcattgagaatgcggtctattatgttgaccctcctgagcggtctgccattcag
cagaaggaacgcacgcctactgagctgttcattcgcaagctcgtctatgtagacatgacc
aaacgaaactataccaagatactcaagcagatccgcagattgcactgggaagagcccgat
gttgttgcaatcctcgccaaagtgttttcgaagcctggcaaggttaagtacggcagcatc
cacattttggcgatccttctcagcgctgtatatcgctaccatccgggttttgtgctcagg
gtaatcgacaacgtcctagactcagtcatgttgggtctcgagcacaacgatttcaagtac
aaccaaaagcggattgcggagatcaagtatctgagtgagctctacaattatagaatgctg
gaacaccctgtcatctttgacaccttgtacaagatcacgacttttggtcatggcggtgca
cctctccctgggcgcatgaacccctttgacttgcctgatgattactttcgcattcgactt
gtcgctactgtactagagacctgcggaatgtacttcagcaaaggaccagctggcaagaag
ctcgattactttctttccttccttcagtattacatctacaccaaggcgcctctccccatg
gatattgaattcattgtgcaagatgtctactctcttacgcgaccccagtggaaacttgcc
acatctctcgaggaagcatcaaaggcttttcaactggctattgcccaggatcaaaagaat
gccggtgtggacggtgctgccgatccagatcctgaagccgaggacgatgcagagagtgta
gcatcttctgatgatgagggtgacggagatggtattatgccagaggctgacggcgaggaa
gatgcaaactctgatgatgatgaaggccacgaacttgatgacaaatcttctggagactct
gaatcagaagaagaggaagaaatcgttgtgactagggagacaggaacgattgatccggaa
gaagaggccgactttgaacgcgagtatgcgaaaatgatggctgagagcttggaatcgcgg
aaatttgaccgcaagccgctcttcgatgtccctcttcccatgcgatcctccaagacccgg
gaggctccaaagacacaagaagtcgaaaaccctgccaacatgatggccttttcattgctt
accaagaagggcaatcgtcagcaaactcgaacggttgaacttccatcggactccaccttt
gctgttgccatgaaaacccagcagcaagcagagcgagaggagcagcaacgcatcaagaac
ctggttcttaattatgatcttcgtgagagcgaagaccctgatggtgatactaccacgaca
cccctcatcaagaattccaatattcacaacagaatgaaagcaggccccgagaagacaact
acgtatcacatcaaccgccctgaaaagcagggtaaagatcgaggcggacaaagagtccgc
aggcttgagatgaacgacttggactggtatggtaacacccgtgataacaatcagcaggca
gcttcacatgtcgagccttccaccagagtggaggcaagtggtgagatcggctttcccagc
aagcgcagagaaagggttccaggatctcaggctcgataccgaaaacaagcctatgccggt
caaagagcccgcgccgcctcataa
DBGET
integrated database retrieval system
