Pestalotiopsis fici: PFICI_05036
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Entry
PFICI_05036 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFICI_05036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfy03021
]
PFICI_05036
Transcription machinery [BR:
pfy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PFICI_05036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Nre_C
Motif
Other DBs
NCBI-GeneID:
19270049
NCBI-ProteinID:
XP_007831808
UniProt:
W3XAT1
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSASPANGPNGQGPTPPQGKAPVPRRRPAKANPFRPVQKPHARPAAVHAPGTPLPASSKG
VPPKPPVPKPLGNSQSQQNFEEDRQKYGGWSFPMREGMGEFDLVLTKKNTKDGLRSHVMR
LIPPRKSENGIDPSDQNEFTRPVLLHRRDPRQPPPGRVLKEPTPIEEETPEQIAERERLA
QIKADRDAQRALDDAQKAPSGGPAKKQPKQKDKPQGTKVNHGPRTEAAKKEFDIRYEEAL
PWHLEDADGRNVWVGQYERPLSETKAAIVYKDNKFMITPLGKWYKFTSKRSSVNAMTIEE
VEAIMKKKAPVGRWAVRDQQREAAEKAINESRGAGMVKQESHTYKQSSRKEKEDHDDIDM
SGDEFQDDDETAGFEPEKDEDSKDSKDKVRRDQLGANLFGAADEKAVESEEAVRRREELE
RKLFGKKMKKALKKRDKQFQYDSDDSERERDPFASSSDESESDSDEEKVKKEEDKDSKDK
DKDKDGKDKNASASKGNGTPQGKKNLADASKKGKSLKRPGSPMVSDSSGNESSRKNKKKK
TGPANASLMGSRSSTPIPRRPGPPGSASDAEATGGEMSDGVGGKIKKKKIGSNLATGTGA
RGTPVGSRAGSPAPSNSQPTAPLTAQEIIDALPENPEDGVTISELLRSFNSRIGEGPNKS
TKADFIQLVKIHGNYKKDTKTLSRKQKQKAT
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtcacctgccaatggccccaatggccaaggcccaacaccacctcaagggaaa
gcaccggttccccggcgccgaccggccaaggcaaaccccttccgcccggtgcagaaacca
catgctcgccccgcagctgttcacgctccaggaactccgctgcctgccagctctaaaggc
gtcccccccaagcctcctgtcccgaagcctctaggaaattcccaaagtcagcagaacttc
gaggaggatcgtcagaagtatggtggctggtcgtttcctatgagggaaggcatgggcgaa
ttcgatttggtcttgaccaagaagaacaccaaagatggcctacgatctcacgtcatgaga
cttatcccaccccggaaatccgagaacggcattgatccttcggatcagaatgaattcacg
cgccccgttttgttgcaccgtcgtgatcccagacaacctccgcctggccgcgtacttaag
gagcccacgcccattgaggaggagacaccagagcaaattgcagaacgagagagactggca
cagatcaaggccgatagagatgcgcagcgtgccttggatgatgctcagaaagctccatct
ggcggtccagccaagaagcagcccaagcagaaggacaaaccgcagggtaccaaggtcaac
cacgggccgcgaacggaggctgccaagaaggagtttgacataaggtacgaggaagcttta
ccatggcacctcgaagatgccgacggtcgaaatgtttgggttggccagtatgagcgacct
ctgtcggagaccaaggcggccatcgtttacaaggataacaagttcatgatcacgccactt
gggaaatggtacaagttcacatccaagcgatcgtcagtcaatgccatgactattgaagag
gtcgaggcaatcatgaagaagaaagcacccgttggacgctgggctgtgagagaccagcag
cgtgaagctgccgagaaggccatcaacgagtcccgaggtgcgggcatggtgaagcaggag
agccacacctataaacagtctagccggaaggaaaaggaagatcacgatgatattgacatg
tcaggtgacgagttccaagacgatgacgaaaccgccggattcgagcctgagaaagatgaa
gatagcaaggactccaaagacaaggttcgaagagatcagcttggtgctaacctctttggt
gctgccgatgagaaggccgtggagagtgaggaagctgtgcgacgtcgtgaggagcttgag
aggaagctgttcggaaagaagatgaagaaggctctcaagaagcgggacaagcaatttcaa
tatgattcggatgactctgagagggagcgggatccttttgcttcttccagcgatgaatct
gaaagtgattcagacgaggaaaaagtcaagaaagaagaagacaaggacagcaaggataag
gataaggataaggacggaaaggacaagaatgccagtgcttctaagggaaatggcactcct
caaggcaagaagaacctcgcagatgcctctaagaagggcaagtcactcaaacgacccggt
tcgcccatggtctcggactccagtggcaatgagtcttcgcgtaaaaacaaaaagaagaag
acaggtccggcaaatgcctccttgatgggaagccgcagttcaacccccatccctcgacgg
cccggcccacccggatcagccagtgacgcagaagccactggaggtgagatgtcagatggc
gttggtggtaagatcaagaagaagaagattggcagtaacctggccactggcactggtgct
cgcggcacccctgttggcagccgagctggcagtcctgctccatccaactcccaacccaca
gcgccgttgacggcccaggagatcattgatgcccttcccgagaatcccgaagatggcgtc
actatcagtgagctgctcaggtctttcaatagccgaattggcgagggaccaaacaagtca
accaaggccgattttattcaattggtcaagattcatggaaactataagaaggacaccaag
accctttcccgaaagcagaagcagaaggcaacttag
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