Pestalotiopsis fici: PFICI_05250
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Entry
PFICI_05250 CDS
T04924
Name
(RefSeq) ATP-dependent RNA helicase dbp9
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_05250
Enzymes [BR:
pfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFICI_05250
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
Pre-60S particles
Helicases
PFICI_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Peptidase_S46
HAD_SAK_1
CMS1
Motif
Other DBs
NCBI-GeneID:
19270263
NCBI-ProteinID:
XP_007832022
UniProt:
W3XBH2
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MKRKLDENDAPSVEVADVDKKEPSFADFNLEPRLLQAIASQRFKTPTTVQQKTIPLALEG
RDIIAKARTGSGKTAAYVLPVLEAILKKKKQASTPYTAALFLVPTRELADQVTTVLESFT
SFCSKEIQIVKLSDRVPDAVSKSLLSNSPDIVVATPARAWHNVKNSALSLDNLTHLVLDE
ADLVLSYGYDDDLQSIAGVIPKGIQTILMSATLTTEVDTLKGIFCRNPTLLNLEDEAEED
KLSQFVVKCAEDEKFLLTYVMYKLQLIKGKSIIFVADVDRSYRLKLFFEQFGIRSCILNS
ELPVNSRLHVVSEFNRNVYDIIIASDENEVIGDEESPEQEDAEEDAETTGKSKKAEAPPK
KKKRKSPKDHEYGVSRGIDFRNVSCVVNFDLPTSARSYTHRIGRTARASQSGMALSFVVP
KEQYRKHMPTTVETAENDEKVLAKIMKQQQKKGREIKPYAFDMKQVNNFRYRMNDALRAV
TSVAVREARVRELRQELAKSEKLKRYFEEKPQELSHLIRHDTEMRTARTQSHLKQVPDYL
LPEGKKALTANEIGFVPFKKDGKSKKGKSFRGKGKRIGTRRVDPLKSFRGRPKSKK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagcttgacgagaacgacgcccccagcgtcgaggtggccgacgtcgacaag
aaggagcccagctttgccgacttcaatctcgaaccccgactcctccaagccattgcaagc
caacgattcaagacacccaccactgtccagcagaagactatcccgttggctctcgaaggt
cgcgacattattgcaaaggctcgcactggctccggaaagactgctgcttatgtattgccg
gtactcgaggccatattgaagaagaagaagcaggcgtctacaccatatactgctgccctc
ttccttgtcccgacccgcgaattggccgatcaagtcactactgtgcttgaatccttcacc
tctttctgttccaaggagatccaaatcgtaaagctctccgaccgagttcctgatgcagta
tcaaagtcgcttctctccaactcccccgatatagttgtcgccactcctgccagggcatgg
cacaatgtcaagaactctgcactatcgctcgacaacctcacccatcttgtcttggatgag
gccgacctggtgctcagttacggctacgacgatgatctccagagcattgccggtgtcatc
cccaaaggcatacagacaatactcatgagtgccacactcaccactgaagttgacacatta
aagggcatcttctgccgaaaccccactcttctcaatctagaagatgaggccgaggaggac
aaactctcgcaatttgttgtcaaatgcgccgaagacgagaaattccttctcacgtatgtc
atgtacaagctccagttgatcaagggcaagtcgatcattttcgtcgccgacgttgatcgc
tcatatcgacttaagcttttctttgagcagtttggaataaggagttgtatcctcaatagc
gaacttccggtcaactccagattacacgtggtatccgagtttaatcgcaacgtatatgac
atcatcattgcttctgatgagaacgaggttattggcgatgaggagtctccggaacaagaa
gatgctgaggaggacgccgagactactggaaagtccaagaaagcggaggcgcccccaaag
aagaagaagcgcaagtcgcccaaggatcacgagtatggtgtctcgaggggtatcgatttt
cggaacgtttcatgcgtcgtcaactttgacctacccacctcggccagatcgtacactcac
cggattggacgtacggcacgagcttcgcagagtggtatggccttgtcatttgttgtgcca
aaggaacagtatcgcaaacacatgccgaccactgttgaaacagctgaaaacgacgaaaag
gtgctggcaaagatcatgaagcagcagcagaagaagggtagagagattaaaccatatgct
ttcgacatgaagcaagtcaacaacttccggtatcgtatgaacgatgcgctacgagccgtc
accagtgtcgctgttcgtgaggcacgtgtacgagagctgagacaggagctggcaaagagt
gagaagctcaagagatatttcgaagagaagccgcaggagttgtcgcatctgatcagacac
gacacagagatgaggacggccaggacacaaagccacctgaagcaggtgccggactatctg
ctgcccgagggcaagaaagctctgacggcaaacgagattggatttgtgccattcaaaaaa
gacggaaaatcgaagaaaggaaagtcgttcagaggcaagggaaagagaatcggtacccga
agagtcgatccactgaaatcgttcagaggaaggccgaagtcgaagaaataa
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