Pestalotiopsis fici: PFICI_05355
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Entry
PFICI_05355 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfy03016
]
PFICI_05355
Enzymes [BR:
pfy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PFICI_05355
Transfer RNA biogenesis [BR:
pfy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFICI_05355
Prokaryotic type
PFICI_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
19270368
NCBI-ProteinID:
XP_007832127
UniProt:
W3XBS6
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MATHTAMTQGNDPELRGSLERKVGILHFVSPKDQGWTGVLRKRFTDFQVHEISEAGEVVH
LKDYFTNARDYERAEARKNGEAASSGQAPGTAKPKENGAATSTESQDGQPTQNSGEDSTT
LKDQATESAAKATEGAPEKTDTADGEIAASDLEKLKESLGSDVTEELVALFKKVLADPEA
RPQTHGLVKFPQIERSVRGPLHAEIRRIFSSKIETETNHDGIIVARAQPPRKSRWGTRAD
NRNRNNQANQVKIGKFLHFSLYKENKDTMEAINILATALGMRPNFFSTAGTKDRRAVTVQ
RVSIRGRDPKKVISANAKLRGLAIGDFKFSDKDLYLGCHNGNEFTIVLKDCTFQGAENES
LDRRLEIAQSTLDRALADISQHGFINYFGTQRFGTYEIGTQTIGMKILQGDLKGVIHDLL
SYDSELATMDPNTLQDDNNRLTDMYRAKALAKYKDGNDADAAAKALPRRCNTEFAILKHL
SKQPTDYHGAVLAITRNMRNMYLHAYQSLVWNFAASKRWELFGKNVVKGDLVFALADDTQ
KAPAKEDLDEENIHLAEAAQSDDGSKPNVRVLTAEDVASGRYSIQDVVLSIPGTDVIYPD
NEIGDFYKEFMGREENGGLDPQNMHRVQKAFSLTGDYRKFMGGFIGSPSGSVHSYGHDHD
QLVPTDLDLIKARQAAARAEAAVDGQGNSSAGWKSFAQNVGEDERNEAKVKLAAAQRRKA
EDMEANQSGSRLNDTWVQTSTDGSNKRVKVDTSTDMIEAQIGSTAQVEASNQHDDVKDLS
TLEVSTPNIVNVESTWVARFKKVLLQLYDATIGNLFRFFNTDKTNRKTPQDTQQPGQSAV
TKVESECEPSDKPAAEGVPQSAPIDTPMADAPLASHVGKPSRVESAQSPGQQDKTLLPVE
DQKIAVVLKFSLGSSAYATMVLRELQG
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacataccgccatgactcagggcaacgaccctgagcttcgcggctcactggaa
cgcaaagttggcattctgcactttgtttccccaaaggaccaaggctggacaggtgtcctt
cgaaagagattcaccgacttccaggttcacgagatcagcgaggctggggaagtggttcac
ttgaaggactatttcaccaatgcccgtgactacgagagagctgaagcaagaaagaacgga
gaagctgcttcatctggacaggctccaggtacagcaaagcccaaagaaaatggtgctgct
acttcaacagagtctcaggacggtcaacctacacaaaacagcggtgaagatagcaccact
ctcaaagaccaggcgaccgagtctgccgccaaggccacagaaggtgctcctgagaagaca
gacactgctgatggagagattgctgcttccgatcttgaaaagctgaaggaatctctgggc
tcagatgtaactgaagagctggtagcccttttcaaaaaggtgctcgctgatcccgaggcc
agacctcaaactcatggcctcgtcaagtttcctcagattgagagatcagtccggggccct
ttgcatgcagaaatccgccgtattttctcgtccaagatcgagacagagaccaaccacgac
ggcatcattgtggcaagagcacagccgccgcgtaagtcacgatggggaactcgcgcagat
aaccgcaatcgcaacaatcaggccaatcaagtcaagattggcaaatttttgcatttctcc
ctctacaaagagaacaaggatacaatggaagcgatcaacattctcgccacagctttaggc
atgaggccaaacttcttcagcacggcaggaacaaaagatcgtcgtgcggtcactgttcaa
cgcgtgagcattcgcggtcgtgatcccaaaaaggtcatttccgccaatgccaagttacga
ggcctcgcaatcggcgacttcaagttctcagacaaggatttgtatcttggctgccacaac
ggtaacgagttcactattgtcttgaaggattgcaccttccagggcgctgagaatgaatcc
ctcgatcgtcggctcgagatcgcccagtccactcttgaccgggcgcttgcagatatcagc
cagcacggcttcatcaactactttggtacccaacgcttcggaacctacgagattggcaca
cagaccattggcatgaagattctgcagggagacttgaaaggtgtcatccacgacttgctt
tcctacgactctgagctggcaaccatggacccgaacaccctgcaagatgacaacaaccgc
ctgaccgacatgtatcgtgccaaagccttggccaaatacaaagacggtaacgatgctgat
gcagccgccaaggctcttccgagaagatgcaataccgagtttgcgatcctcaaacacctg
agcaagcagcccaccgactaccacggggcagttcttgctatcaccaggaacatgcgcaat
atgtatctgcacgcttaccagtcccttgtctggaactttgccgcaagtaagcgctgggaa
ctgttcggcaaaaacgtggtcaagggagaccttgtattcgccttggcagatgacactcag
aaggctcctgccaaggaggatcttgatgaggaaaacattcatctggcagaagctgcccaa
agtgacgatggctcgaaaccgaatgtccgcgtactcactgctgaggacgttgcaagcggg
cgctattccatacaggacgttgtgctgtctatccctggcacagatgtgatctatcccgac
aatgagattggagatttctacaaggaattcatgggtagggaggagaatggcggccttgac
cctcaaaacatgcatcgcgtacaaaaggcgtttagcctgacaggagactaccgcaagttc
atgggtggattcattggttcgccgtcgggtagcgtccatagctacggccatgaccatgat
caactagttccgacagatcttgacctcatcaaggctcgacaggccgcggcacgtgccgaa
gctgcagtagatggccaaggaaactcatcggcaggctggaaatcatttgcacaaaacgtt
ggagaagacgagcgcaacgaagccaaggtcaaacttgcagctgcgcagagacgcaaggcc
gaagacatggaggctaaccagtcaggatcccgcctgaacgacacctgggttcagacttcc
actgatggaagcaacaagagggtaaaagtcgatactagtactgacatgattgaagctcag
attggtagtacggcacaggttgaagcatcgaaccaacatgatgatgtcaaggatctatcc
acattggaggttagtacgccaaatattgttaacgttgagtcgacctgggtggcgcgcttc
aagaaagttcttttgcagctctacgacgcaaccatcggcaatctttttcgatttttcaat
actgacaaaaccaaccgcaagacaccccaggatactcaacaacccggacagtcagctgtc
accaaggtcgaatcggaatgtgagccatctgacaagccggccgctgagggtgttccgcag
tcagctcctatagacacccctatggctgacgctcctttggcaagtcatgttggaaagccg
tcaagggttgagagcgcgcagagcccagggcagcaagacaagactctgcttccagtagag
gatcaaaagatcgccgttgttctgaagttctctcttggctcgagcgcatatgccacgatg
gtgctccgcgaactccagggctag
DBGET
integrated database retrieval system
