Pestalotiopsis fici: PFICI_05556
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Entry
PFICI_05556 CDS
T04924
Name
(RefSeq) ATP-dependent RNA helicase DBP8
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_05556
Enzymes [BR:
pfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PFICI_05556
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
90S particles
Helicases
PFICI_05556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
19270569
NCBI-ProteinID:
XP_007832328
UniProt:
W3XCA4
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MPSRTSGAKKSRPAHTEELEVVSLASQSEASSDDEGSSEGDDASDSDALDSDAPRKKRKV
SVEIEVEPEDDEPYETSVISSIQAPSRIGKKRAPAAPEASQPVKPMAMNIPTATSVPVDP
KVTFESLSLRPWLVQSLSNMAIKRPTGIQKACIPEILAGRDCIGGSRTGSGKTVAFAAPI
LQKLAEDPSAIFAVILTATSRELALQIMEQVKAISSAQTVKAILVTGGADMRAQAIAIAQ
RPHVIVATPGRLADHIRSSGEDTWCGLRRVKFLVLDEADRLLSEGPGSMLPDIEQCLRVL
PPASERQTLLFTATMTPEVRALENLPRKPGKPAPFLCEVDTQVLAIPATLNQMYLQVPVT
HKEHYLHELLLTDANAEKSIILFCNRTSTAEYLHHLLRLLDHRVTSLHSKLPQRQRIDNL
GRFRASAARILVATDVAARGLDIPEVSLVINYDLPREPDDYIHRVGRTARAGRKGDAVSF
VGQRDVDLVHAIETRVGRDLVAWEEEGVNLETRVVRDALKLVSEKKREALLEIEENKEVG
GKRKRGMQKLRAE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaggaccagcggcgccaagaagtcgcgcccggctcataccgaggagctggaa
gtcgtctctcttgcatcgcagtcagaggctagcagcgacgatgaaggctctagcgaaggc
gacgatgcctctgattcggatgccttggacagcgatgcccctcgaaagaagcgcaaggtg
agcgttgagatcgaggtggagccagaggacgatgagccatacgagacctctgtgatctcc
tcgatacaggctccgtcgcgcattggaaagaaacgtgccccggctgctccagaagcttcg
cagccagtgaaacccatggctatgaatataccaacagcaacatctgtgccagtagaccca
aaagtcactttcgaatccttgagcctgcggccatggctggttcagtcgctttccaatatg
gccatcaagcggcctacgggcattcagaaagcatgtattcctgaaatcttagcaggaagg
gattgcatcggaggaagtcgtactggttcaggaaagacagtcgcgtttgccgcccctatc
ttgcagaaattggccgaggatccaagtgccatctttgcagtgatcttgacagcaaccagc
agagagcttgccctccaaatcatggagcaagtcaaggccatttcgtctgcacagaccgta
aaggccatcttagtcacaggtggtgctgatatgagagcacaggcaatcgcaatcgctcag
cgcccgcacgtcattgttgcgacgccggggcgcctcgcagatcatatccgtagctctggc
gaagacacatggtgtggccttcgaagagtcaagttcttggtgctcgatgaagccgataga
ttattgtcagagggtccgggctcgatgctgcctgatatcgaacaatgtttacgtgtgctg
cctcccgcttcagagaggcagactctgctcttcaccgcaaccatgactcccgaagtgcgg
gccttggagaaccttccccggaaaccaggcaaaccggcgcctttcctatgtgaagttgac
acgcaagtgcttgctattcctgccacattgaaccaaatgtaccttcaggtgcccgtcacg
cacaaggagcattaccttcatgaactgctcctcactgacgcgaacgcggaaaagtccatt
attctgttttgcaatcggacgagcactgcagaatacctgcatcatttgctacgactcttg
gaccatagggtgacatcacttcactccaagctgccacagcgccagaggatagacaacctg
gggagattcagggcttcagcagcgcgtatcctggtggctacagatgtggccgctagaggt
ctcgacatcccagaggtctcgttggttatcaattacgatctgcccagagagccagatgac
tacatccacagagttggtcgtaccgctcgtgccggacgcaagggtgacgcggtgagcttt
gttggccaacgtgacgttgaccttgtccatgctattgagaccagagttggtcgcgatctg
gtggcctgggaggaggagggtgtcaacctagagaccagagtagtcagagatgcgctcaag
ctcgtcagcgagaagaagagggaggcacttctggaaatcgaggagaacaaggaggttggc
ggaaagaggaaaaggggtatgcagaaactccgtgcagagtga
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