Pestalotiopsis fici: PFICI_05644
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Entry
PFICI_05644 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03430
Mismatch repair
pfy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PFICI_05644
03460 Fanconi anemia pathway
PFICI_05644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_05644
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PFICI_05644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
19270657
NCBI-ProteinID:
XP_007832416
UniProt:
W3XCG0
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MATIKAIEARTVHQIQSGQVIVDLCSVVKELVENSVDAGATNIEVRFKNQGLDSIEVQDN
GGGIAPDNYETLALKHYTSKLSTYEDLASLETFGFRGEALSSLCALSKFSVLTCLASDAP
KGTRLEFEISGTLRGTSVVAAQKGTTVVVEDLFNNLPVRRRELQRNIKREWNKVIGLLNQ
YACILTRVKFSVSQQPNKGKKIILFSTKGNATTRENIVNVFGAKTLTVLIPLELDLELEP
TTAPSQRLVTKKETNTKEVKIRGHVSRPAHGEGRQTPDRQMFFVNGRPCGLPQFAKVFNE
VYKSYNSSQSPFICADIQLDTHMYDVNVSPDKRTILLHDQSRLLDNLRESLIALFEVQDY
SVPASQLNGPKQAAARKLAVNRQNTVESEPRSNRSTSMNPKNDDHNDEDEVDTPTGQNPD
EDETVGDQQQNRGTSYSNAAQSSEGPTFISRWLDKRSTDRPQGPGVPKPIDSTTSDITRS
SQITEGNSLDHKFPEKTSLLSPQRAGFVARLDELSRNKASTETVDIDHENQATPESPIPS
VGRPSRTSEIKNVQWSPRRFKRTAPEIATITIDGETVTSIIGSPAKKVRTERSNPGKSHE
DQSTAQKAAQMPSFKGRLTQMFSASSSSHACSEGIGLMPSLGESPRRSRSPSTASAASEG
LFVESDKDADEEPASPISEAKSGQIETHASGIGRGTPAHSAISRETDSADAYELELSNSN
LPVRSEQEFADEAEQKAQEEDRVRDMIDSAEDVAKITAEESQKRQQTFVKGMTRRKDATC
QFMQKVRTNTDTIAAALSSLDEYSSHTTLGADADFSKNDISGEDAEEKLSLTISKSDFDK
MKIVGQFNLGFILAIRYASRNTDDAEDWHAVDDELFIIDQHATDEKYNFERLQATTVVQS
QRLVQPKALELTAIEEEVIKENIEALESNGFQVSIDESGYQPVGSRCQLLSLPLSRETTF
TLADLEELISLLTDHQSTSVNTIPRPSKVRKMFAMRACRSSVMIGKSLSNKQMEKLVRHM
GELDKPWNCPHGRPTMRHLCGLGAWNDSVWQEGDGPDGEPGTSTNWSAYLKEQRTSNPN
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatcaaggccatcgaggcccggacggtccaccaaattcaatcagggcaggtc
atcgtcgacctttgctccgtggtgaaggaactggttgagaatagtgtggatgcgggagct
acaaatatcgaggtgcgtttcaagaaccaagggctggattccattgaagttcaggataat
ggcggtggcatcgctccggacaactacgaaacactggccttgaaacactatacctcaaag
ctctcaacctacgaggacctcgcttcgcttgaaacttttgggtttcgaggagaggctctt
tcgtcactttgtgctctttccaaattctctgttctcacttgcctggcctcggatgctccc
aagggcaccagactcgagtttgaaatatctgggacacttcgagggacgtctgtcgttgca
gcccagaaaggcaccacagtcgtcgttgaggaccttttcaacaatttgccagtcaggcgg
cgtgagctgcagcggaatatcaagagggagtggaacaaagtcatcggcttacttaaccag
tatgcctgcatcttgaccagggttaaattctctgtttcgcagcaacccaataagggcaag
aagatcattctgttctcaaccaaaggcaatgccaccacacgagaaaatatcgtcaatgtt
ttcggagccaaaaccctgacggttctcatacctcttgagctggatctcgagctggagcct
actacagccccgagccagcgattggtgacaaaaaaagaaacgaatacgaaagaagtcaag
atccgcggtcatgtgtccaggcctgcccacggagaaggtcgacagacccctgatcggcag
atgttctttgttaatgggcggccttgtgggttgcctcagtttgccaaagtcttcaacgag
gtctacaaatcttacaactcgtctcaatcgccgttcatctgtgcagatatacagttagac
acgcacatgtatgatgtcaacgtcagcccagacaagcgaaccatcttactgcatgatcaa
tctcgactactcgataaccttagggagtcacttatcgccctgttcgaggtgcaggattat
tcagtcccagcatcacagctcaatggcccaaaacaggcagctgccagaaagctagcagta
aaccgccagaatacagtggaaagtgaacccagaagcaataggagtacttcaatgaacccc
aaaaacgatgatcacaatgatgaggacgaggtggacacacctactggccagaacccagat
gaagacgaaacagtgggagatcagcagcagaaccgcggcacctcttattcaaacgcagcg
caatccagcgaaggtccaactttcatcagtcggtggctggacaaaagatccacagatcgt
ccacagggtcctggcgtaccaaagccaatcgattctacgacatctgacattacccgatct
agtcagataaccgaaggcaatagccttgatcacaaatttcccgagaagacaagtctgtta
tcaccacaaagagcaggctttgtagctcgcctcgatgagctgagtcgaaataaagcaagt
accgaaaccgtggatatcgatcacgaaaatcaggcaacacctgagtctcccattccaagt
gttggcagaccctctcgaacatccgagatcaaaaacgtgcaatggagcccaagaagattt
aaacgtaccgcacctgaaattgctacaattacgatagatggtgaaaccgttactagtatc
ataggctcgcctgcgaaaaaggtccgaactgaaaggtccaacccagggaagtcacacgag
gatcaaagtactgcgcaaaaagccgcgcaaatgccgtccttcaagggtcgcttgacgcaa
atgttctcggcatcaagctcctctcacgcctgctctgaaggtatcgggctaatgcctagt
cttggggaaagcccgaggaggtccagatcaccaagcactgccagtgcagcaagtgaaggc
ctatttgtagagagtgacaaagatgcagacgaagagcctgcttcccccatcagcgaagcg
aagtcaggacagattgagacgcatgcttcaggcattggcagaggcacgcctgcccactca
gctataagtcgtgagactgacagcgccgatgcgtatgagctcgagttgtccaactcaaat
cttcctgttcggagcgagcaggaatttgcggatgaagccgagcaaaaggcacaagaggaa
gacagagttcgtgacatgatcgacagtgcagaggatgtggcaaagatcactgctgaagag
tcacaaaaacggcagcagacttttgtcaaaggcatgacgagacggaaggatgccacatgc
caatttatgcagaaagttcgcaccaataccgacacgatcgctgcagctctttcctcactc
gatgaatattcttcgcataccacacttggtgcagatgcagacttttcgaagaatgatatc
tcaggtgaagatgcggaggagaagctttctttgaccatttcaaagtctgattttgacaag
atgaaaatagttggtcaatttaatctcggtttcatcctggcgattcgctacgcgagtagg
aatacagatgatgcagaagactggcatgctgtggacgacgaactgtttattatcgaccag
cacgcaacggacgaaaaatataacttcgagcgcttgcaagcaaccacagtggtacaatca
cagaggcttgtacagcccaaagctctcgagcttaccgcaattgaagaagaggtcatcaag
gaaaacattgaagcactggaaagcaatggttttcaagtcagtatcgatgaaagtggctat
cagccagtcggatctcgttgccagctgcttagtttgcctctgagccgggagacgactttt
acgcttgcagatctcgaggagctgatctctctcctcacggatcatcaatccacgtctgtg
aataccatacctcgtccgtcaaaagtacgcaaaatgttcgccatgcgtgcttgccgcagc
agtgtcatgattggcaaatcactctcaaacaagcagatggaaaagcttgtgagacatatg
ggagaacttgataaaccatggaactgcccgcatggtcgtcctaccatgaggcatctctgt
ggacttggtgcttggaacgactcggtctggcaggagggcgatgggcccgatggagagcca
ggaacttcaacgaattggtcagcgtatcttaaggagcaacgcacatcaaatcctaactga
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integrated database retrieval system
