Pestalotiopsis fici: PFICI_05665
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Entry
PFICI_05665 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFICI_05665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_05665
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PFICI_05665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Cytochrom_D1
DUF7165
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
19270678
NCBI-ProteinID:
XP_007832437
UniProt:
W3XCR2
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MPHSEQDGPLAKRQKLAVSQKPSAQKQQSRIFAPYRTIGLVSPTNVPFTTVPLGKTTFQL
TTSVGRSLQTYDLRRGLNLVFITRPQTPFDITATHAWRQKVFAAFGDARNGETQGLWVLQ
RGKKIAELELPLDLEEPVKQILVSGSWIIAACLTRIEVWKTETLEHYTTLFTMAAKKGDN
EISGGICTMPTYLNKIFVGRRDGWVEIWNVSTGKLIYTIVPPSADCGAVTCLQPSPVLSL
MGIAYSSGPLIVHNILTDKTVLRVNAGTEDAPVTAITFRTDGQGAGQDGRKDGVMATATS
ASGDVTFWDLNKGGRVMGVLRSAHNPPSRDGPAVRGGVSKIEFLAGQPVIVTSGRDNSLK
TWIFDETPFSPIPRILHSRSGHAAPVTSLQFLPSDFDGADAGNKWLLSAGQDRSLWGWSL
RRDGQSTELSQGAIRKKAKKFGLLAGDVLKNGPTTTLDDLKAPEITCIACSLNRDGGMGA
MPGKQAMWQKSQDRKSKPSDAELSGMTGWESVVTAHKNDSYARTWFWGRKRAGRWAFPTG
DRTDVSTVAISPCGTFAVIGSIGGTIDMYNLQSGVHRQRYPSTLTPAQARQAKMQQLRQA
DSIMQLDARSTTGFAAGVGKHTKAVTGIIVDSMNNYIISCSLDGKIKFWEFLTGRLKHEI
SWAPMTAITGCRYHAANDLIAFSCDDQSIRVVDIETKQTIREFWGCQGKINDFTFSNDGR
WIVAASQDSIIRVWDLPTSHLIDAIRLEQPCTALAFSLTGEYLAAAAEGQLGVNVWTNKT
LFTHVPTRQISEKEIGQVDGPTTSGEGGQGLIDAAFEEAAPADEDTVAAPSLDQLSAEMM
TLSLVPRSRWQTLLHLDLIKKRNKPQEAPKQPEKAPFFLPSTTNSSVPQAGAIAEAGDAA
TSQSRITKFDRSSRSEEAFTSKLRNGAESGNYDDFIEHLKSLSPSSADLELRSLSASEVD
EDSNELLQFIRALTSRLQSRKDYELTQAWMTVFLRLHFDMIMESDTLMAALQDWKRHQAE
ECERLNNLVGYCSGVVSFLRSPRT
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgccgcactccgagcaagacggccctctggccaagcgccagaagctcgctgtgtctcag
aagccctcggctcagaagcaacagtcgaggatattcgccccgtaccggacgataggactt
gtctcgccaacgaatgttcccttcacaactgttcctttgggaaagacaacctttcaattg
acaacgtcggtcggccgctctctgcagacctacgacttgcgacgcggtctcaacctggtc
tttatcaccaggccacaaacgccatttgacattaccgccacacacgcttggaggcagaag
gtctttgctgctttcggagatgcgcgcaatggagaaacacagggcctttgggttctgcag
agaggtaaaaaaattgctgaattagagcttccgctggatctcgaagagcccgtcaagcag
atcttggtgtccggctcttggatcattgcggcttgtctgaccagaatcgaggtgtggaag
acggaaacacttgagcactacacaacgctgttcaccatggccgcaaaaaagggcgacaat
gagatcagcggtggcatctgcaccatgccaacctatctcaacaaaatctttgtcggtcga
cgggacggatgggtggaaatctggaacgtttcgacaggcaagctcatttacaccattgtc
ccgccatctgcagattgcggcgctgtcacttgcttacaaccttcgccggttctttccctc
atgggtatcgcatactcaagtggcccactcatcgtccataacatcttgacagacaagaca
gtccttcgagtcaacgcaggcacagaagacgcgcccgtgacagccatcactttccgaacc
gatggtcagggtgcaggacaggatggacgaaaggatggagttatggctaccgcaacgtca
gcaagcggcgatgtcactttctgggatctcaacaagggaggtcgagttatgggtgtcctt
cgaagtgcgcacaacccgccttctcgagatggacccgccgtgcgtgggggagtgagcaag
atcgagttccttgcaggacagcccgtcattgtcaccagcggccgagacaactccctcaag
acctggatctttgacgagactcccttttcaccgatcccgcgcattcttcactccagaagt
gggcatgccgccccagtaacttctttgcaattcctgccgtccgactttgatggcgcggat
gctgggaataaatggctgctcagcgctggtcaagacaggagtttgtggggctggagtctt
cgcagagacgggcagagcacagagctcagccagggcgctattcgcaagaaggccaagaag
tttggtctcctggctggagacgttctcaagaatggacctacaacaacgcttgatgatctc
aaggcaccagagattacctgcattgcctgctccctcaaccgagacggtggcatgggtgcc
atgcctggaaagcaagccatgtggcaaaagtcgcaagatcgcaagagcaagccctcggat
gcggagcttagtggcatgactggatgggaaagcgtcgtgacggctcacaagaatgactct
tatgctcgcacttggttctggggccggaaaagagcaggtcggtgggctttcccgactggt
gatcggacagacgtgtcgactgtagccattagtccgtgcggcacttttgccgtcattgga
tccattggcggtaccatcgacatgtacaatctgcagtcaggagtgcatcgccagagatat
ccttcgaccttgacaccggctcaagcgagacaggccaagatgcagcagctcagacaagct
gatagtattatgcagctcgatgcaaggtcgacgactggctttgctgccggtgttggcaaa
catacgaaagcagttactggcatcatcgttgattccatgaacaactatattattagctgt
tctcttgacgggaagatcaagttttgggagttcttgactggaaggttgaagcatgaaatt
agctgggcacccatgacagcaatcactggatgccgataccacgcagcaaatgatctgatt
gcattctcgtgcgacgaccagtcgataagagtggtagacattgaaacgaagcagacgatt
cgagagttctggggttgccaaggcaagatcaacgacttcacattctctaatgatggacgc
tggattgtggcggcttcgcaagattccattatccgtgtatgggacctgccgacgagccat
ctgattgatgctatccgtttggaacagccatgcactgctctggccttctctctgactggt
gaatatctggctgctgcggctgaaggccaactcggggtcaatgtgtggactaacaagaca
ttgttcacgcacgtccccactagacagatttccgaaaaggagattggtcaggttgatgga
ccgacaacgtctggagaaggcggccaaggattgattgatgccgcattcgaagaagcggcg
ccggcagacgaagacactgttgctgcaccatctctcgatcagctgagcgccgaaatgatg
actctcagtcttgtaccacgaagcagatggcagacgctcttgcatctcgatctcatcaag
aagagaaacaagcctcaggaagcacctaagcaacccgagaaggcaccattcttcctgcct
tccaccaccaactcatctgtgccccaggccggtgctattgcagaggccggtgatgctgcc
acaagtcaatcaaggataacaaagtttgaccgatcctctcgcagtgaagaagctttcaca
agtaagctgaggaatggtgcagagagcggaaattacgatgatttcattgagcatctcaag
tccctttcgccttccagtgctgatctcgagcttcgatctctatccgcgagtgaagttgac
gaagactcaaacgagctgcttcagttcattcgagccttgaccagccggctccagtcccgc
aaagactacgagctgacgcaagcgtggatgacggtgttcttgcgattgcattttgacatg
attatggagagcgataccctgatggcggctttgcaagactggaagaggcaccaggccgaa
gagtgcgagaggctcaacaacctcgtgggttactgtagtggtgttgtcagctttttgaga
agcccgcgcacttga
DBGET
integrated database retrieval system