Pestalotiopsis fici: PFICI_05703
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Entry
PFICI_05703 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfy03016
]
PFICI_05703
Enzymes [BR:
pfy01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PFICI_05703
Transfer RNA biogenesis [BR:
pfy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
PFICI_05703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Circovir_ORF3
Motif
Other DBs
NCBI-GeneID:
19270716
NCBI-ProteinID:
XP_007832475
UniProt:
W3XEK2
LinkDB
All DBs
Position
Unknown
AA seq
341 aa
AA seq
DB search
MASDSSRSPVRISKVTDRYLLFDIDDIMYLRRHHNICSPFVGTMPQAPSQSVFMGLPIEL
MAEEAMVLVRKKAAYVVDDAAFHPSRLASPDPAVRAAYLQAMKQDGLGAATAAREYAEFR
KVQGLNKAKAKGKKAQKTKEDTSSITSAGAVTSSKEPDNAAAEAAASVDEELNLFDSSDS
QVTKQANKPKASVAAIEPFAITPVTSGALMDPPPSVDEEEDTASLVDAPRGYPLYAHLHD
HGYYMMPGLRFGCDYNVYPGDPLRYHSHFQATHYGWNDEIKLLDIVGGGRLGTNVKKAYL
IGGATAGEGKTSGEVVGGHGVKATSATGPPVRAFSIEWAAM
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacagctccaggtcacccgtcaggatctcaaaggtcactgatcggtacctg
ctcttcgacattgacgatatcatgtacctccgccgtcaccacaatatctgctcgcccttt
gtaggaaccatgccgcaagccccgtcgcagagcgtcttcatgggcctgcccattgagttg
atggcagaagaggccatggtgctcgtgcgcaaaaaggcggcctacgtagtcgacgatgcc
gcgtttcatccgtcgcggctggcgtcccccgaccccgctgtgcgcgctgcctatctccaa
gccatgaagcaggatggactgggcgccgccaccgccgcacgtgaatacgcagagtttaga
aaggtacagggcctcaacaaggccaaggccaagggtaagaaagcgcaaaagaccaaagaa
gatacgtcgtccatcaccagtgccggtgccgttaccagctccaaagagccagacaatgct
gcagcagaagcagcagcctctgtagatgaagagttgaacctctttgattcgtcggattcc
caagtgaccaagcaggccaacaagcccaaagcatcggtagcggccattgaaccttttgcc
attacgcccgtcactagcggcgcattgatggaccccccgccgtccgtggacgaggaagag
gataccgcgtcgctggttgatgctccccgcggctaccccctctatgctcacctccacgat
catggctactacatgatgcctggtctgcggtttggctgtgactacaatgtctatcctggt
gaccccctgagataccacagtcactttcaagcgacgcattatggctggaatgacgagatt
aagctgctggacattgttggcggtggaagactaggcaccaatgtcaagaaggcttacttg
ataggcggtgcaactgctggcgagggcaagacgagcggtgaggtcgtcggtgggcatggg
gtcaaggcaaccagtgccactggacctccagtcagagctttcagcattgaatgggctgcc
atgtaa
DBGET
integrated database retrieval system
