Pestalotiopsis fici: PFICI_05705
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Entry
PFICI_05705 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_05705
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PFICI_05705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
19270718
NCBI-ProteinID:
XP_007832477
UniProt:
W3XCU5
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MADRRRINGPVGTTTPPVFVHAPARPRPRESDSIRKIYLKTGITPSASGSAYLELESRPG
HPHRSNLKLSCTVHGPRALPRSAPFSPHIILTTHVKYAPFATRTRRGYLRDSSERDLGVH
LETALRGAIIADRWPKSGVDIIVTIVEGDQDRDAPHNQDDENWEMMNVLSGCITVASAAI
ADAGIDCVDTVAGGVAALVSKKDGQVPSIIVDPIVAENQKILAACCVAYLPSRDEVTNLW
FKGQLPGGDFMVYNTMLERSMVASRSANRVIVQALSETAKKGQEAT
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgtaggaggatcaatgggccagtcggaaccacgacaccgccggtatttgtc
catgcacctgccaggccgagacccagagagtccgactctattcgcaagatctacttgaaa
accggcataactccctcagcctctgggtcagcctacctcgaactcgaaagccgcccgggt
caccctcacagatcgaatctgaagctttcatgtaccgtacacggcccaagggctctccct
cgatcggcgccgttttcgcctcatatcattctgactacgcatgtcaagtacgctccattt
gcaactaggacacggcgtggatacttgagggactcgagcgaacgtgacttgggcgtacat
ttggagactgccttgcgcggtgccatcattgcagatcgatggccaaaaagtggtgttgac
atcattgttacgatagtcgaaggcgaccaagatcgcgacgccccccacaaccaagacgat
gagaactgggagatgatgaatgtgttgagcggctgtattaccgttgcctccgcagcaatc
gcagatgccggcattgactgcgtggatactgtggctggaggtgtcgcggccctggtttcc
aagaaggacggtcaagtgccgagtatcattgtggaccccatcgtggctgagaaccaaaag
atcttggccgcttgctgtgtggcatacctgccctcacgagacgaggtgacgaatttatgg
ttcaaaggacagcttcctggcggcgatttcatggtttacaacactatgctcgaacgaagt
atggtggctagccggagcgccaacagagtgatagtgcaagctctgagtgaaacggccaag
aaggggcaagaagctacctga
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