Pestalotiopsis fici: PFICI_05727
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Entry
PFICI_05727 CDS
T04924
Name
(RefSeq) Synaptobrevin
KO
K08516
synaptobrevin homolog YKT6
Organism
pfy
Pestalotiopsis fici
Pathway
pfy04130
SNARE interactions in vesicular transport
pfy04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
PFICI_05727
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PFICI_05727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pfy04131
]
PFICI_05727
Membrane trafficking [BR:
pfy04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
PFICI_05727
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Herpes_UL36
DUF16
Motif
Other DBs
NCBI-GeneID:
19270740
NCBI-ProteinID:
XP_007832499
UniProt:
W3XF79
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
MKLHYIGIIKNDVKPGIELVSEKELSAYSRFTRQNYGEFMTMFSKTVAERTRPGQRQDVE
EQDYTFHAYARSEGVCGIIISDHEYAPLAAHQLLSKVLDDFLASHPKSAWANGQLQTMPE
LKEYIAKYQDPTQADGIMKIQRELDETKIVLHKTIESVLQRGEKIDDLVAKSDGLSAQSK
MFYQQAKKQNSCCLIM
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcactatatcggaatcatcaagaacgatgttaaacccggcattgagctggtg
tcggagaaggagctcagcgcatactcgcgattcacacgccagaactatggcgaattcatg
accatgttctccaagacggtcgcggagcggacgcgcccaggccagcgacaggacgttgag
gagcaggactatacgttccatgcgtacgcgcgatccgagggtgtgtgcggcatcatcatc
agcgaccacgagtatgcgccgctggcggcacatcagttgctgtccaaggtgctcgacgac
tttttggcgtcgcaccccaagtcggcctgggccaacggccagctccagaccatgcccgaa
ctcaaggagtacattgcaaagtaccaggacccgacccaggccgacggcatcatgaagatc
cagcgcgagctcgacgagaccaagattgtcctccacaagacgattgagagcgtgctgcag
cgcggcgagaagattgacgacctggtggccaagagtgacggcctgagcgcacagtccaag
atgttctatcaacaagcaaagaagcagaactcgtgctgtttgatcatgtag
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