Pestalotiopsis fici: PFICI_05865
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Entry
PFICI_05865 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PFICI_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfy03036
]
PFICI_05865
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_05865
Chromosome and associated proteins [BR:
pfy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
PFICI_05865
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
PFICI_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
19270878
NCBI-ProteinID:
XP_007832637
UniProt:
W3XD99
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MASPSEADGKAASSSLDDDILPAHTNVVVAETIPSNSAPASQASDEVSASISNDSDVPLD
EQEALRDLTSNVRDQDDLERDITFQANLAFIEAEDERDKKRIAKLEANIQKFEAQKKSQE
ERFRKAIGKPDLKNKIREEIARLDSEIALASNDIADFNARIEQRNQSTGDASRLSQAGNK
KLPNETHREFLIRTGKITPFANIGGPRPEEVQGQLANALVDAEDEAIAEEMEEEATHGPR
SHRNLRAPGFADAEDVNEAAILAQSEFSLRPRKTQKKRRVEPKGDSSDDYQPSSSRSTRP
EADFVVDGDEEESDDDYDLTELPHKKPSKATKTSDEVKINPGRVDDGNEADYQSRLLSWC
QRRSAARRQKQLARGEAVEADDDEPEWHKPSPDEPDHHLDNGLKLPGDIYPSLFDYQKTG
VQWLAELWNQKAGGIVGDEMGLGKTVQVISFVSAVHYSKRLDGPVIIVAPATVMTQWVNE
FHRWWPAMRVSILHSSGSGMVNVRREDRLVEDDIAWDDVRYQQGKKSSPAARKIVKRVVE
QGHVLVTTYAGMQTYADILLHVDWAYAVLDEGHKIRNPNSAITVACKMLKTPHRIILSGT
PMQNNLLELWSLFDFVFPMRLGTLPDFRTEFEIPIRIGGYANASNLQILTAQKCAEILKD
TISPYLMQRFKVDVAADLPEKSERVLFCKLTKQQRNAYQLFLESDEMKSILSRTRQSLFG
IDYLRKICNHPDLTDPLLRKRVSYDWGNPKKSGKMQVVKALLPMWKKNGHKTLLFSQGVQ
MLEILEQFIQKTGDIKYLRMDGKTPVKERQVLVDQFNNDPELDVFLLTTKVGGLGVNLTG
ANRVIIFDPDWNPSTDVQARERAWRLGQKREVVIYRLMSAGTIEEKIYHRQIFKQFLSNK
VLRDPKQRAAFELNDLYDLFTLGDATDDQTQTGRLFQGSEVKVAGALSGSDGAMSSASSL
NDNRKATYDGTLLTAALNAVDDLNNIEGVAGLEDYQTSADEKPSSDEARIMEGLFARSGV
HSAVEHDEIVNGKRKPQANHAMLQQTAAADAAKAAASLRRAHDQAVRIPIGTATWTGEVG
EGGRPSAPSNIRRGLGGPGSASILSGLRDRQGLNVPGTSSPGARSSSGASSAQGATPTPT
TNIGLKDFERMITQFIRRHGGQVATKLLVDHFNPYCITRKQTTEFKTALDRVAKLEKKGG
SMRSVWGLRTLPNLDVFMD
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccttccgaagccgacggcaaggcggcgtcatccagcctggatgatgacatc
ctgcctgctcacactaacgttgtcgtcgccgagaccatccctagcaattcagcacctgca
agccaggcttctgacgaggtatctgcgtcgatctccaacgacagcgatgttccgcttgac
gagcaggaagcactacgggacctgacctcgaatgtccgcgaccaggacgatcttgagcgc
gacatcactttccaagccaaccttgccttcatcgaagctgaggatgagagggataagaag
cgcatcgcaaagctagaggccaacatacaaaaattcgaggcacaaaagaaatctcaagaa
gagcgatttcgtaaggcaatcggcaaacctgatttgaagaacaagattcgtgaagagatt
gcccgtctggattctgagatagctctcgcttccaatgacatcgcagactttaatgctcgc
attgagcagagaaaccagtctactggtgatgcatccagattatcccaagctggcaacaaa
aaactacctaatgaaacccaccgagagtttcttattcggactggcaaaatcacgcccttt
gccaatattggaggacctcggcccgaagaagtccaggggcaattggccaacgcacttgtt
gatgccgaagatgaggccattgccgaagaaatggaagaggaggcgacgcatggaccgcga
tcacaccgtaaccttcgcgccccgggtttcgctgatgccgaggatgtcaacgaggccgcc
attctggcccaatcagaattctcacttagaccacgaaagacccagaagaagcgtcgcgtt
gagcctaagggcgactcttcagatgattatcagccctcctcgtctcgctcgacccgccca
gaggctgacttcgtcgtagacggcgatgaggaggagtctgacgacgactatgatctcacc
gaactaccccacaagaaaccctccaaggccacaaaaactagcgacgaagtcaaaatcaac
cctggccgagttgatgatggtaatgaggctgattaccagagccgccttttgagctggtgt
cagcgacggagcgctgcgagacgtcaaaaacagctcgcccgcggtgaagctgtagaggca
gacgatgatgagcccgagtggcacaagccttctcccgacgaaccggatcaccaccttgac
aatggactcaaacttcctggagatatctatccgtccctctttgactatcagaagactggt
gttcaatggctagccgaactctggaaccagaaagccgggggtattgtaggggacgagatg
ggtctgggcaagacagttcaggtcatctccttcgtatcagcagtccactacagcaagaga
cttgatggcccggtcattattgttgccccagccacagtcatgacgcagtgggtaaacgaa
tttcaccgatggtggccggctatgcgcgtctctatcctccattcctcgggaagtggcatg
gtcaatgttcgtcgcgaggatcgcctggtagaggatgacatagcatgggacgacgttcga
tatcagcaaggcaaaaagtcgagcccagctgctaggaagattgtcaagcgtgttgtggag
caaggccacgtactggtcacgacctatgctggtatgcagacttacgccgacatcctcctg
cacgtcgactgggcatatgctgtccttgatgagggccataaaatcagaaatccaaactcc
gcaatcaccgtagcctgcaagatgttgaaaacaccccatcgcatcattctttctggcaca
cccatgcagaacaatttgctggagctgtggtcgttgttcgactttgtatttccgatgcga
ctcggaactctccccgatttccgtaccgagtttgaaatccccatcagaatcggtggctat
gccaacgcctctaaccttcagatcctgacagcccagaaatgcgcagaaatccttaaggat
accatcagtccctacctcatgcaacgcttcaaggtcgatgtggctgctgatctcccagag
aagagcgaacgtgttctgttctgcaagctcacgaaacagcagcggaacgcctaccagctg
tttctcgaatctgacgaaatgaaatctatcctaagtcgcactagacagtcgctgttcggc
attgactatttgcgaaagatttgcaatcacccagatctgacagatccattgctcaggaag
cgggtcagctacgactggggcaacccgaagaagtcaggcaaaatgcaagtggtcaaggct
ctgcttccgatgtggaagaaaaatggccacaagacgcttcttttctcgcaaggtgtgcag
atgctagagattctcgagcagttcatccagaaaactggtgatatcaagtatctcagaatg
gatggcaaaactcccgtcaaggagagacaggtccttgttgatcaattcaacaatgatccg
gagctggacgtgttcctacttacgaccaaagtgggtggccttggtgtaaatctgactggt
gccaatcgtgtcatcatattcgatcctgactggaacccgtctacagatgtgcaggctcgc
gagagagcctggcgtttgggacagaaacgtgaagtcgtcatttatcgacttatgtcggct
ggaaccatcgaagaaaagatctaccatagacagatctttaagcagttcctgagcaacaag
gtcctgagggaccccaaacaacgtgccgcattcgagctcaacgatttatacgacctcttc
acgctcggagatgcaacagacgaccagacccagactggccgacttttccaggggtcagag
gtaaaagttgcaggtgcgctatctggttctgatggagcaatgtcatcagcttcctccttg
aacgacaatcgcaaggcaacatatgacggtactttgttaactgcagctctgaacgctgtc
gacgatctcaacaatatcgaaggcgtggcgggcctcgaagattatcagacttcagctgac
gagaaacccagcagtgacgaggcacgtatcatggaagggctcttcgcgcgctctggggtt
cattctgctgtggagcatgacgagattgtcaacggcaagcgcaagccacaagccaatcat
gccatgctgcagcaaacagctgcggccgatgccgcgaaagcagctgcatcgctgagacgg
gcgcatgaccaagccgtcaggattccaattggcactgccacgtggactggcgaagttggc
gagggtggtcgtccgtctgccccgtccaacatccgtcgcggtttgggaggaccaggctcc
gcatcgattctttccgggcttcgtgatcgccagggactcaatgtgccgggtacctcctca
cccggggcccgttcgtcgagcggtgcctcctctgctcaaggcgcaacacctacaccaacg
acaaacattggtctcaaagactttgagcgcatgattacccagttcatccggcgacacggc
ggccaagttgccacgaaactgctcgtggaccatttcaacccgtactgcatcacccgcaag
cagaccacagaattcaagacagcgcttgatcgggttgcgaagttggagaagaaaggaggt
tcaatgcgtagtgtctggggtctacgtaccttgcccaaccttgacgtgtttatggattga
DBGET
integrated database retrieval system
