Pestalotiopsis fici: PFICI_06196
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Entry
PFICI_06196 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PFICI_06196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_06196
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PFICI_06196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
19271209
NCBI-ProteinID:
XP_007832968
UniProt:
W3X5A1
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MTQTQGASLTNSQEAKAASKRKREADEYSKSKRTKRDKLKNKGRELIASVRESSPVSEPN
EQNGVGHESPLVERKAHEVKQAQQKANKIARKQDPSSWKVSQSVGGRMLDIDPILTSDDR
HLIIPYTSSVQIYSATDSLLFRKITLDLSAKSNERVVAISLSPTSPNLLWIASSTGRIWQ
GDWVAGIGFDKSIQLDCIVLTDLTVAPMLMKNRLIDVPFVSILANETWHVVACYVQDMMI
KNKKTILSRGEIIENLKSMNNGSSLAASSRNNILIGSLSTSTIPSIKELSYEFYVLDCPD
EITCIDLRVAERIHLSRKSQQQTGDEPVMEVVVGCARGSIYYYNDLLPQLRYLQKAGRGA
SLQPRKYHWHRKAVHAVKWSQDGNYIISGGSESVLVQWQLDTQKIDVLPHLTATIENIVI
SARGSSYVIHLGDNSTMIMTTAEMKPTTYISGVQSLVTPRPPSKDNFVRRIGYAEDQGTV
SRIPAIIDPKDRTRLLLCVGNGQQGAPAGAMPSMPLLQTVDLSTMQGLSKQAITRTHPTD
VNTTSKGFPITEPRVAHMAYSHDAKWLATVDEWQPPSRDTEVLESTPSDRLEVFLKFWSA
SADGQSLELVARINAPHYTGRDERVLDLAADPTSHTFATVGEDGVLRLWRPAIRQRDGIV
VKSRTGRGLESWTCVNTIHLQENKALADSNVVPVKAPRQRSGAVSFSEDGSMLACAFQNG
AESAVYLVDVNSGAIVDSLDGLINGQIQSLRVLASQLVVLSQDLVVYDIVQDELVYGIQL
SSETSGSPVQALSQLAVDYPSRSFAVAISNQNRLGVIKSEVAVFNADQSEPEFIQQFSQP
VVSLITTPGSSGYLVLDASAQVCSITQSNDATSVAVAQSLADIDLDQTEVDKSQESGVIA
IVNEEQDDAASDEEMEDVVEDAMEEDEDSSPVVVPPQKLAELFDAAPPFAMPPIEDMFYQ
VTKLFTAKSQ
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacccagggcgcatctctgaccaattcgcaggaggccaaggcggcaagcaag
aggaagcgcgaggccgacgagtacagcaagagcaagcgaaccaagcgagacaagctcaag
aacaagggcagagaattgattgcgtccgtccgagagagctcgcccgtgtcggagccaaac
gaacagaatggtgttggccatgaatcccctcttgtcgaaagaaaagcgcacgaggtgaag
caggcgcagcaaaaggcgaacaaaatagctaggaagcaggatccctcctcgtggaaggtg
tcccagtccgtgggcggcaggatgctggatatcgaccccatattgaccagcgatgatcga
cacctgatcataccctacaccagctcagtccagatttattctgccaccgattcgctcctg
ttccggaaaattactctggatctttccgccaaatcgaatgagcgtgttgtggccatctcc
ctatcgccaacctcaccaaacctcctttggattgcatcttcaaccggtcggatatggcag
ggtgattgggtagctggcatcggtttcgacaagtccattcaactcgactgcattgtgctt
accgatctcacggtagcacccatgctcatgaagaatcgcctcatcgacgtcccctttgtc
tctattctggccaacgagacttggcacgtggtggcatgctacgtacaggatatgatgatc
aagaacaaaaagaccattctatcccgtggtgaaatcatcgagaatctcaagtctatgaac
aatggttcatctttggcggcttcttcccgtaacaacattttgattggttccttgagcacg
agcaccatcccctctatcaaggagctgtcttacgagttctatgttctcgattgccccgac
gaaatcacttgtatcgatctccgtgtcgccgagcgcattcacctcagccgaaaatcgcaa
cagcagactggagacgagcctgttatggaagttgttgttggatgtgctcgcggatcgatt
tactactacaatgatcttttgccccagctgagatatctgcaaaaggctggccggggcgct
tccctgcaacctcgtaaataccactggcaccgaaaggccgtacacgctgtcaaatggtcc
caggatggaaactatatcatctctggtggctcagagtctgtcttggttcaatggcaattg
gatacccagaagatcgacgttctgccacatctgacggccactatagaaaatattgtcatt
tctgctagaggatcgagttatgtcattcaccttggggacaattcgaccatgatcatgaca
actgctgaaatgaaacccaccacctacatttccggcgttcagtcccttgttactccccga
ccgccttcgaaagacaactttgtcaggagaattggttacgctgaggaccagggaacagtt
tccaggataccagcaatcattgacccaaaggatcgcacacgcctgctcctatgtgtcggc
aacgggcaacaaggcgctcctgctggcgccatgccgtccatgccactcctccagaccgtg
gacctgagcacaatgcagggtcttagcaagcaggcgattacccgcactcacccaacagac
gtaaatacgacttcaaagggcttccccatcacagaaccacgagttgctcatatggcctac
tcccacgatgcaaagtggctggcaactgtagacgagtggcaaccgccttcaagggacact
gaagtccttgaaagcacaccatccgacagactcgaggtgttcctcaagttttggagtgct
tcagctgacggccagagcctcgaattagttgcccgtatcaatgctccacattacactggg
cgtgatgagcgcgtccttgacctggcagcagatccaacctcacatacattcgccactgta
ggtgaggatggagttctaaggttgtggcggcccgccattcgacagcgtgatggaatcgta
gtcaaaagccgaacaggacgggggctggagagctggacttgtgtcaacacgatccatctc
caggagaacaaggcacttgccgactccaatgtcgtgccagtcaaggcaccacgacaacgt
agcggtgccgtctcgttctccgaggatggttccatgctggcctgtgcctttcagaatggt
gccgagtccgcagtctaccttgtcgatgtcaactctggcgcaattgttgactcactggat
ggcctcattaatggccagattcagagtcttcgcgttcttgcctctcagcttgtcgtgttg
tcacaggaccttgttgtctacgacattgtgcaggacgagttggtctatggcattcagctt
agctccgagacaagtggatcaccggtacaggcgctgtcgcagcttgcagttgattatcct
tctcgcagttttgccgtcgctatttcgaaccagaacagacttggtgtcatcaaatccgaa
gttgctgttttcaatgctgatcagtcggaacccgaattcattcagcaattctcgcaacca
gtagtctctttgattacgacacctggttcaagtggttacctggtgctggatgcatctgcc
caagtttgttcaatcactcagagcaatgacgctacatccgtggcggtggctcaatcatta
gcagacatcgacctggatcagacagaagtcgacaagagccaagaatctggcgtgatcgct
attgtgaacgaagaacaggacgatgctgccagcgatgaggaaatggaggacgttgtcgag
gatgccatggaggaagacgaggattcttctcccgtggtggttccgcctcaaaagcttgca
gagttgttcgatgctgcaccgccatttgctatgcctcccatcgaggatatgttttaccag
gtgaccaaactgtttacggcaaagtcgcaataa
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