Pestalotiopsis fici: PFICI_06335
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Entry
PFICI_06335 CDS
T04924
Name
(RefSeq) Transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfy03021
]
PFICI_06335
03036 Chromosome and associated proteins [BR:
pfy03036
]
PFICI_06335
Transcription machinery [BR:
pfy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PFICI_06335
Chromosome and associated proteins [BR:
pfy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PFICI_06335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
HHH_7
YqgF
Spt6_S1
SPT6_acidic
Tex_central_region
S1
S1_RRP5
HHH_9
SH2
HHH_3
Motif
Other DBs
NCBI-GeneID:
19271348
NCBI-ProteinID:
XP_007833107
UniProt:
W3X5E2
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MSSTMRDLVMGEADEGSSDEESYDEETGETRDRKNRRNQNGDVDDSSEEEDDDDDEEEAA
KVREGFIVDEDEEEDDIQDSAEERKRRKRKRRQEREEEAQLDEEDLDLIGETLGEPAQPE
KKKMKRLRIGHRDSDDRRNERRGLDDMFSDEDEEADDRAYARPTRPGRMEDEMDDFIEDD
DPVDEDERFRQIEDAEVARPRDRGLAGTVLDTTGLDQEVLDDMEEIFGNGEEYDWALQLE
EEEEDRRFQDQNLELKDVFEPSQLQEKLLTDEDNVIRNTDEPERFQLDRKPFKSLQITSE
QFKEEAKWITNLMWPKKQLPKRLEEPFQRAIGKVLEYFVVEMLEVPYVFQHRKDYLIHAE
KRENPDHKHDPDAPESIVSAEKLLTQDDLWRVLELDIKFRAFIERRNALEKNFENLREKA
GIQDDILEELIPTAQLMEELQDLQDYVNFQYSAQLKDIAAMEGNTKETKRPGTKSSAWER
TRRSKVYNFVKAYGISADRLAQNLQRDDGKRSLVDDDEKAPEDLADSLTDADAPSAEAVI
SQARLMYTEELFANPRMRKYFRAHFYNYGEISCRRTDKGLRRIDESHPFYEIKYLVNQTI
PDLLRRPELFLKMMKAEEEGLVEIKLRLQNERKFRQQLDAEFKSDNYSSAADAWNEERRR
VLDSAFYKLERVIAKGVKESLRTFCQEELLKICREEYSKRLDQAPYKPKGMVLGTTPRVL
ALSNGMGDVGRDPTFWAWVEEDGRVIEQGRFGNLARDDAQREAFTEVVERRKPDVIAVSG
FCADTHKLVRDIEGLVGEKRLMGPDFEDPDTGDYRSELLDVFVVNDEVARLYKDSPRAIA
EHPGLPAVTRYCVALARYLQNPMKEYATLGKDITSVSFHPCQNLLPQDKLLRSLETSMVD
MVNLCGVDINEAVGDSYVANLLPYVSGLGPRKATAVIKAINLNGGAVNSRDELVGDPDNN
KLPVVGPLVWMNCASFLFLEYDPSNPASEPLDNTRVHPEDYELGRKMAADALELDEEDVQ
AETAENGQGAIVRKLFKEDEQDKVNELILEEYAEQLESKYAQRKRATLETIRAELQAPYE
ELRRHLGPLESDRIFTMFTGETKDSLTEGMVLPINVRVVKDDFAIVKLDCGIEGRVDAHE
VSHRTNISIKEILRPGQTVQAKILDLNRKDFLAKVSVREDATKKPYRRHADHDPDTWDFR
LEDDDREELREKDKVTGRVQRVIKHPMFKPFNSTEAEQYLGSQAVGDLVIRPSSKGNDHL
TITWKVADGVFKHVDVVELQKESEFAVGKILRVEGKYSYSDLDELIVEHIKAMARKVDQL
TGHDKFRKGSLSEIEKWLTAYTDANPKAAVYTLCIDPKHPGYFFLAFKTNKQSKIFWWPV
KILPNAYEMLKNQYPDMRALTNGFKLRIQSELNRAASTRR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcactatgagagacctcgtcatgggcgaggccgatgaaggcagctccgacgag
gagtcctacgatgaggaaactggcgagactcgagaccgaaagaaccgccgcaatcaaaac
ggtgatgtcgatgactcgagcgaggaagaggatgatgacgatgatgaggaagaagccgca
aaggttcgagagggcttcatcgtcgacgaggacgaggaagaagacgacatacaggactcg
gccgaggagcgcaagcgcaggaagcggaagcgccgacaggaacgggaagaagaagcacag
cttgacgaggaagatctcgacttaatcggagagacgttgggcgagcctgcgcagccagaa
aagaagaaaatgaagcgacttcgaatcggtcatcgcgactcggacgatagaagaaacgag
cgccgcggccttgatgacatgttctctgatgaggatgaggaagcggatgatcgagcatat
gcccggcctacccgccctggtcgcatggaagacgagatggacgacttcattgaggatgac
gatcctgttgatgaggatgagcgttttcgccagatcgaagatgctgaagttgcccgcccc
cgagatcgtggccttgctgggacagttctggacactactgggcttgatcaggaagttctc
gatgacatggaggaaatcttcggtaatggcgaggagtacgactgggcacttcaactggag
gaggaagaggaagaccgccgcttccaagatcagaatctggagctcaaggacgtattcgag
ccgtcgcaattgcaggagaagcttctgacggatgaggacaacgtcatccgtaacacagac
gagcctgaacgctttcagctcgacaggaagcctttcaaatcgcttcagatcacaagcgaa
cagttcaaggaagaggcaaagtggatcacaaaccttatgtggccgaaaaaacagcttcct
aaacggctcgaggagccattccagagggccatcggcaaagtacttgagtattttgttgtc
gagatgctcgaggtgccatatgtctttcagcaccgcaaggattatctgattcatgccgaa
aagcgagagaatcctgatcacaagcatgatccggacgctcctgagagtatcgtcagtgct
gagaagcttcttacccaagatgacctgtggagagtcttagagctggatatcaagttccga
gccttcatcgagagacgcaatgctttggagaagaactttgaaaatttgagagaaaaggct
ggcatccaagacgacattcttgaagaactaattcccacagctcagctcatggaggaactg
caagacctgcaggactacgttaactttcagtattctgcccagctcaaagacattgccgcc
atggagggaaacaccaaggagacgaaacgccctggaacgaagtcctcagcttgggagcgc
acgagaagaagcaaggtctacaacttcgtcaaagcctatggtatctccgctgatcgtctt
gcacaaaaccttcaacgcgacgatggcaagaggtcgcttgtggatgatgatgagaaggca
cccgaggacctggctgactcgttgacggacgctgatgcgccgagcgccgaagccgtcatt
tcccaggctcgactgatgtacacagaagaactctttgcaaaccccaggatgcgaaagtac
ttcagagcacacttctataactatggtgaaatcagctgtcgtcgaacggacaaaggacta
cgaaggattgatgaatcccatccattttatgagatcaaatatctcgtcaaccagacaatt
cctgatctcctacgtcggccggaactcttcttgaagatgatgaaggcagaagaggagggg
ctggttgagatcaagctacgactccagaatgagcgcaagttcagacagcagctggacgcc
gaattcaagtcggacaactacagctctgctgctgatgcgtggaacgaggaacgacgaaga
gtgctagactctgccttctacaagttggaacgggttattgccaagggcgttaaggagtcc
ctgcgaacgttctgccaagaagagctacttaagatctgccgcgaagagtattcaaagaga
cttgatcaagccccctacaagccgaaaggaatggtattgggtacaacacctcgagtcctt
gcattgtcaaacggcatgggcgatgtcggaagagatcctactttctgggcctgggttgag
gaagatggtcgagtcatcgagcagggccggtttgggaaccttgcccgcgacgacgcccag
cgcgaggcttttacggaagtcgttgaacgtcgaaagccggatgtgattgccgtcagcggt
ttctgtgccgatacgcataagcttgtgcgagacattgaaggtctcgttggcgaaaagcgt
ctcatgggccccgacttcgaagaccctgacacaggcgactatcgcagtgagctgctggac
gtgttcgtcgtcaacgatgaagtggcaagactctacaaagatagtccacgagcaattgca
gagcatccaggtctacccgcagtcactcgttactgtgttgcgctggctcggtatctccag
aaccccatgaaggagtatgcaacactcggcaaggatatcacatctgtctccttccatccc
tgccagaatcttctgccgcaggacaagctgctcagatccctcgagacatcaatggtcgat
atggtcaacctatgtggtgtggatatcaacgaggcggtcggagattcttatgttgccaat
ttgctcccgtatgtttctggtctaggccctcgaaaggccactgcggtgatcaaggcaatc
aatctcaatggcggtgctgttaattccagagacgaactggtcggagaccctgataacaac
aaactccccgtggttggtccgcttgtatggatgaactgcgccagtttcctctttttggaa
tacgacccgtcgaatccagcatccgagcctctggacaacactcgtgttcaccccgaagac
tacgaactcggccgaaagatggcggctgatgctctagagctcgacgaggaggatgtccag
gccgagactgctgaaaatggtcaaggtgctatcgtgcgcaagctcttcaaagaggatgag
caggacaaggtcaacgagttgattctcgaagagtatgccgagcagctagagtcgaaatac
gcacagcgaaagcgagctacactggagacgatccgtgctgaactgcaagctccatacgaa
gaacttaggcgacaccttggcccacttgagagcgaccgcattttcacaatgtttaccggt
gaaaccaaggactcattgaccgaaggcatggttctacctatcaatgttcgtgttgtcaag
gatgatttcgccattgtgaagcttgattgtggcattgaaggacgggtagatgcccacgag
gtcagccaccggaccaacatttctatcaaggaaatattgcggccgggtcagaccgtgcaa
gccaagatcctcgacctaaacagaaaagacttccttgcaaaggtgtcggtgcgcgaggat
gctacaaagaagccatatagaaggcatgccgatcacgatcccgacacgtgggacttcagg
ctggaggacgacgatcgggaggaactacgtgagaaagacaaggtgactggtcgcgtacag
cgagtcatcaagcatccgatgttcaaacctttcaactctaccgaggcggagcagtatctt
ggttcccaagctgtgggtgatttggtgatcagaccgtcctcaaaaggaaatgaccacttg
accataacatggaaggtcgcagacggcgtgttcaagcatgttgatgttgttgaacttcaa
aaagagagcgagttcgctgtcggcaagattctgcgcgtggagggcaagtacagctactcg
gatcttgacgagttgatcgtggagcacatcaaggcaatggcccgcaaggtcgaccagctt
actgggcatgacaagttccgcaagggaagtttatctgagattgagaaatggctcacagcc
tataccgatgcgaatcccaaggctgctgtatacacattgtgtattgaccccaagcacccg
ggctacttcttcttggccttcaagaccaacaaacaatcaaagattttctggtggccagtc
aagatcctacccaacgcctacgaaatgctcaagaatcagtaccctgatatgagggcattg
accaacgggttcaaattgcgcatccagagcgagctcaacagggcagccagtacgcggcgg
tag
DBGET
integrated database retrieval system
