KEGG   Pestalotiopsis fici: PFICI_07016
Entry
PFICI_07016       CDS       T04924                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PFICI_07016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_07016
   03019 Messenger RNA biogenesis [BR:pfy03019]
    PFICI_07016
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     PFICI_07016
Messenger RNA biogenesis [BR:pfy03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PFICI_07016
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_9 Abdominal-A
Other DBs
NCBI-GeneID: 19272029
NCBI-ProteinID: XP_007833788
UniProt: W3X7K9
LinkDB
Position
Unknown
AA seq 267 aa
MATATSTTAASTPKELAQQILEHRAPTYTFTFSPFLRKTYGHGLAPNRPVCKAFAATGAC
PLGTDCPDRHEAPNAASSTNASYNSLVCKHWLRALCKKGESCEFLHEYNLRKMPECNFFV
RNGYCSNGDECLYLHIDPQSKLPPCPHYDMGFCPLGPNCSKKHVRRTLCPYYLAGFCPDG
KQCTEGAHARWSKNLERPVPKSEKAAEDEAARREREEQAFAAGGDDDGGFRRGDRDDKDD
GRGFRGGRGRGGWKPRGRGFGRGRGHR
NT seq 804 nt   +upstreamnt  +downstreamnt
atggcgactgcgacctcaaccacagcggcgtccacgcctaaggagctggcgcaacagatc
ctcgagcacagagcacccacctacacattcacattcagtcccttcctacgcaagacgtac
ggccacggcctggcaccaaatagaccggtatgcaaagcctttgcagcgacgggggcctgc
ccactggggaccgactgcccagaccggcacgaggcgcccaacgcggcgtcaagcaccaac
gcctcgtacaacagcctcgtatgcaagcactggctgcgcgcgctgtgcaaaaagggcgag
tcgtgcgagttcttgcacgagtacaacctgcgcaagatgcccgagtgcaacttctttgtg
cgcaacggttactgctccaacggcgacgagtgcctctacctgcacattgacccccagagc
aagctcccgccctgcccgcactacgacatgggcttctgccccctcggccccaactgcagc
aagaagcacgtccgccgcaccctctgcccttactacctcgccggcttctgccccgacggc
aagcagtgcaccgagggcgcccacgcgcgctggagcaagaacctcgagcgacctgttccc
aaaagcgaaaaggcggccgaggacgaggccgccaggcgggagcgtgaggagcaggccttt
gctgccggcggggacgatgatggtgggttccgcagaggtgaccgggatgacaaggacgac
ggcagaggcttccgtggcggtaggggccgtggcggttggaaacccaggggaagaggcttt
ggtaggggccgaggtcatcgctaa

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