Pestalotiopsis fici: PFICI_07323
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Entry
PFICI_07323 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03022
Basal transcription factors
pfy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFICI_07323
09124 Replication and repair
03420 Nucleotide excision repair
PFICI_07323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfy03021
]
PFICI_07323
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_07323
Transcription machinery [BR:
pfy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PFICI_07323
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PFICI_07323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
19272336
NCBI-ProteinID:
XP_007834095
UniProt:
W3XAX9
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAQPKGTAVYKKKDGTIIISDDQKFVTWTPAAAPGGPPVVSLAVANITNLQQTPDSSPKV
MLKIFEKAPGAEEPTPYLFNFNSAGDPRGEANAIKELLSRLLADSRSNDPNVPRPNASAA
AGPSATSSAAGSGSGSMTFASAVNAKPAIARVFDDSQLKGDIALQQSLMKADRNLHEMYM
EARSTKPETMSNATFNAQFWSTRLNLLRAHAIETGQKKGPYNILSVAKPISETSADPNQP
DRQKLSITVEQVQLILNQHPLVKRIYNENVPPLTENEFWERFFLSKLVKKLRGERPAGNE
QPDKVFDRYNEFENITAFSSKLLTQHVPHIIDLEGNEENQGGYKGGNKKDAEMRPRGWKY
VPIIQTLNSISGKLLVNVTPADTEMMDPARPEDDEVYDQLALRDLRGDTEEQRVILNVRE
QSRFFSAQRDANTASDDAYGKQDPSQALRGVKRDIAQLYRDDSMGVDLHAAIGINDESES
DEESAKRVHVGSRSSRRDAHKQVLDSMKQRRAQLFGSTSDESTPMGLPVDIAARCNLTHA
TTMEFVNQFWSAFLSGDPDRAVEVGYLVESLKRCKERIDVVAAEAERAREDIIAKRKDEI
IRVYERTKKKIKFNPKTIKGGRDAVEKLMQPVVHSLNLAISDYQRALASEGVQASTES
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaccgaaaggcacagccgtgtacaagaagaaagacggcaccataataatcagc
gatgaccagaaattcgtcacctggaccccagcggctgccccgggagggccgccggtcgtg
tcactggcagttgcgaatattacgaatctccagcagaccccagactcgtcgccaaaggta
atgctcaagatatttgagaaggcgcccggcgcagaagagcctacaccgtacctgttcaat
ttcaactccgcaggtgacccgagaggcgaggccaacgccatcaaagaactgctttcacgg
cttcttgccgattcgagaagcaatgatccgaatgtcccccgaccaaatgcttcggcggcc
gctggacctagtgctacttcttcggcagcaggaagtggctctggctctatgacatttgca
agcgcagtgaatgccaagccagccattgcgcgcgtcttcgatgacagccagctcaagggc
gacatcgcattgcagcagtctctcatgaaagccgatcgcaaccttcatgagatgtacatg
gaggcgcgctccaccaaaccagagaccatgtctaatgcgacgttcaatgctcagttctgg
tcgacgaggctgaatctcctgcgagcacacgctatcgagactggtcagaagaaaggccca
tacaacattctttccgttgccaagcctatctccgagacgagtgcggatccaaaccagccc
gatcgacaaaagcttagcatcactgttgaacaggttcagctgatcctcaaccaacatccg
ctggtgaaacgtatctacaatgagaatgtgccaccacttactgagaatgagttctgggag
cgcttcttcctaagcaagctcgtaaaaaagctgagaggagagcgacccgccggtaatgag
cagcccgacaaggtctttgacagatacaatgagtttgaaaatatcacggccttctcgagc
aaactcttgacccaacatgttccccacatcatcgacttggaaggcaacgaggaaaaccag
ggtggctacaaaggaggcaacaagaaagacgctgaaatgcgaccacggggctggaaatat
gtacccatcattcagaccctcaacagcataagcggcaagctgctcgttaacgtcaccccc
gccgataccgagatgatggatccagcacgaccggaagatgatgaagtatatgatcagctc
gcgcttcgtgatttgcgcggtgataccgaggagcagcgcgtcatcctcaacgttagggaa
cagagccgcttcttctcggcgcaaagagacgctaatacggcttctgacgacgcatatggc
aagcaagatccgtctcaagccctgcgaggtgtgaagagagacattgctcagctttataga
gatgactcaatgggcgttgatcttcacgcagctattggcatcaacgatgaaagcgagagt
gacgaggagtcggcgaagcgtgtgcacgtggggtctcgctcgtcgaggcgcgatgctcac
aagcaggttctcgacagtatgaagcagagaagagcccaactgtttggctccacctcggac
gagtcaacacccatgggattgccggtcgatattgccgccaggtgcaacctgacacacgcc
accacgatggaatttgtcaaccaattctggtcagcctttctctcgggagacccggacagg
gccgtcgaggttggatatctcgtagagtcgctcaaacgatgcaaagaacgcattgacgtt
gtggcagctgaagcggaaagggcacgcgaggacatcattgcgaagaggaaagatgaaatc
ataagagtgtacgagcgaacaaagaagaagatcaaattcaacccaaagaccatcaagggc
ggccgcgatgcggtggaaaaactcatgcagcccgttgtccactcgctcaacctggcaata
tcagattatcaaagagcactcgcctcggaaggtgtacaagcaagtacggaatcttag
DBGET
integrated database retrieval system
