Pestalotiopsis fici: PFICI_07343
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Entry
PFICI_07343 CDS
T04924
Name
(RefSeq) ATP-dependent DNA helicase II subunit 2
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PFICI_07343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_07343
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PFICI_07343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
Motif
Other DBs
NCBI-GeneID:
19272356
NCBI-ProteinID:
XP_007834115
UniProt:
W3X1D1
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MADKEAVVYIVDLGSSMADCHNGRIESDLDFSMRWIWDKISTTVAAARKTWNVGVIGVRT
NETNTGLEDEDGYDNIAILQELQPMDLAKMRYLQTKIKPSDSDTGDCVSALIPAIQMIEK
VAPARLKFNRKIFMVTSGEAPLDLDPDDISSIAEKLQDNKIQLTILGVDFDDAEYGFKEE
DKTEQKATNERLLKSLVDAVGEDLATFGTIAEAVDELDMPRLKQNKPYKTYDGDLVLGEH
AESMRIHVERYFKTKRAAPPTASNVVLKVNHGSQSTEALDGEGMEGVEYEKGGEFAAVKN
ARTYKVNDPDGPGGKRDVDFEDLAKGYAYGQTAVHISESEFNITKLETTKGFSIIGFIQQ
DKFEPFLKFGESCVTVAQKNSDADALKLSSLIHSLHENESYALARLVKKDGNNPELVLLA
PHIDVDFECLYDIPMPFAEDVRQYPFPPLDKVVTVQNNVLTKHRFLPSEDLLEAMDEYVD
AMDISTYALDDEGERTLEYAAVDDTFSPPLHRVNQVVRHRAIHADKPVPPMPPILVKYRI
PDHDLVEKAKSKLDDLIATAEVKKVETKAKGKRGGKQEPKARKPLSGLDVDALLREPANK
RTKVDPDNAIPSFKQLMESSDNDDVLQEAPKQMGAVIRDLVSESFGDLNFDRATENLGVL
REYMILFEEPQRYNDFLKDFKKRLFTGALGGDRREFWFNNVRKPKLGLIDTTESEFSKVT
TEEAAEASTRTWCISGLLFHANILQFLKSNLK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagctgtcgtgtacattgtcgatcttgggtcgtccatggccgattgt
cacaatggcaggatagaatcagatctcgacttctctatgcgctggatatgggacaaaatc
tctaccactgttgccgccgcaaggaaaacttggaacgtgggcgtcattggcgtaaggaca
aatgagacaaacacgggcttggaagacgaagatggttatgataacatcgccatactccaa
gaactccagcccatggacttggccaagatgaggtatctgcagacaaagatcaagccaagt
gatagtgacacgggcgactgcgtctctgccctcatccctgccattcagatgattgagaag
gtcgccccggcaaggctcaagttcaaccgcaagatcttcatggtcacctccggggaagcc
cctctcgatttggatccggatgatatcagcagcatagctgagaagcttcaagacaacaag
atccaattgacaattttgggtgttgattttgacgatgcagagtatggtttcaaggaagag
gacaagacagaacagaaagccacgaatgagaggctgctaaagagcttggttgatgctgtc
ggtgaggacctggcaacgtttggcaccattgcagaagctgtcgatgagctcgacatgccg
agactcaagcaaaacaagccatacaagacttatgacggcgatctggttttgggtgagcat
gcagaatccatgcgtatccacgtcgagcggtatttcaagacgaagagggcagcacctcct
actgccagcaatgttgtcctgaaggtcaaccatggatcacagtcaactgaggcccttgat
ggcgaaggcatggaaggtgtcgaatacgagaagggcggcgagtttgccgccgtcaagaat
gctcgcacgtacaaggtcaatgacccagatggaccaggcggcaaaagggatgtcgatttc
gaagatttggcaaagggatacgcatatggacaaactgctgttcacatcagcgagtctgaa
ttcaacatcaccaaacttgagacgaccaagggcttttccatcattggcttcatccagcag
gacaagtttgaaccctttctcaagtttggcgagagctgtgtcacggtagcacagaagaat
agcgacgctgatgctttgaaactttcgtccctcatccactctctccacgagaacgaatcg
tatgctctggcccgactggtcaagaaagacggcaataatcccgagctggtcttgcttgca
ccccacatcgacgtggattttgaatgtctttacgatattcccatgccctttgccgaggac
gtacggcagtatccgttcccaccccttgacaaagtggtgactgtccagaacaacgtcttg
accaagcaccggttcctaccatccgaagatttgctcgaggctatggatgagtatgtggac
gccatggacatttcaacatatgccttggacgatgaaggcgagagaacattggagtatgct
gcagtggatgataccttttctcctccgctccaccgcgtcaatcaagtcgtccgccacaga
gcgatccacgccgataagccggtcccgccaatgcctcccattctggtcaagtaccgcatt
ccagaccatgatctcgtcgaaaaggcaaagtcgaaactcgacgatctaattgcgacagcc
gaagtgaagaaagttgaaaccaaggcaaaaggcaagcgtggtggtaaacaagaaccaaag
gcgagaaaaccgctgtctggcttggacgtcgatgctctgctaagggaaccggccaacaag
cgcacaaaagttgatccagacaatgccattccatctttcaagcagttgatggagtcatca
gataacgacgatgtgctccaagaagcgccaaaacagatgggggcagtgattcgcgaccta
gtgtctgagagttttggtgatctgaactttgaccgagcgacagaaaacttgggtgttctc
cgcgaatacatgatcctatttgaggaacctcaaagatacaacgatttcctgaaggatttc
aaaaagagactctttactggcgcattaggtggagataggagggaattctggttcaacaat
gtgaggaaacccaagcttgggttgatcgacactacagaatccgagttttcaaaagtcaca
accgaggaggctgccgaggcaagtactcgaacttggtgcatttcaggattgctgttccat
gctaacattttgcagttcttgaaatccaacttgaaataa
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