Pestalotiopsis fici: PFICI_07545
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Entry
PFICI_07545 CDS
T04924
Name
(RefSeq) Cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PFICI_07545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_07545
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
PFICI_07545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
19272558
NCBI-ProteinID:
XP_007834317
UniProt:
W3X4B4
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MSTVTATALQSGQPPIIPLEFNGNQPKTIRLYPLSNYTFGVKETQPEEDPSVIARLKRLE
EHYSEHGMRRTCEGILVCHEHNHPHILMLQIANAFFKLPGDYLRPEDDEVEGFKSRLDER
LAPVGRLGEGVEPGNWQVGDCLAQWWRPNFETFMYPFIPAHVTRPKECKKLYFIELPEYK
VLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYNFEFVDESGNIVAATPGTGPE
GFVPQTHVLAGGDEDMRDAKDENGGS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggtcacggcaacagcattgcaatcgggccaaccccccatcatcccactcgag
ttcaacggcaaccaacccaagaccatccgactctacccgctttccaactacacatttggc
gtcaaggagactcagcccgaggaggatccatcggtgatagcccgtctgaagcgtctcgaa
gagcactactcagagcatggcatgcggagaacctgcgaaggcatcctcgtttgtcacgag
cacaaccacccgcacattctgatgctgcagatcgccaatgcctttttcaaattgccgggc
gactatctacgaccagaggatgacgaagtcgagggcttcaagtcgcggttggatgagcgc
ctggcgccagtgggcagactcggcgagggtgttgagcccggcaactggcaggtcggggac
tgcctcgcacagtggtggcggccaaactttgagacgttcatgtatcccttcatcccagca
catgtgacgcggccaaaggagtgcaagaagctctatttcattgagctgccagaatacaag
gtcctcagcgtgccaaagaatatgaaacttttggctgtgcccctgttcgagctctacgac
aacacggcacgatatggtccccagctttcggccattccccatttacttagtcggtacaac
tttgaattcgtcgatgaaagcggaaatattgttgcagccacgcctggtacgggccccgag
ggttttgtaccacagacacacgtcctcgccggtggcgatgaggatatgcgggatgccaaa
gacgagaatggcggaagctga
DBGET
integrated database retrieval system
