Pestalotiopsis fici: PFICI_07637
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Entry
PFICI_07637 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFICI_07637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_07637
Enzymes [BR:
pfy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
PFICI_07637
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
PFICI_07637
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
PFICI_07637
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
PFICI_07637
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
PFICI_07637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
Phage_TAC_5
Motif
Other DBs
NCBI-GeneID:
19272650
NCBI-ProteinID:
XP_007834409
UniProt:
W3X1U9
LinkDB
All DBs
Position
Unknown
AA seq
308 aa
AA seq
DB search
MPTTDSDNEDAITKEEIAGEASAPPPTKAGLTKTTTKSNACMSLCFPVLAMNTKIFSVTE
LMRPKPKVPAQSKTSSSKASTAGHSFKNRAGLGLYTHDPAAFPSSRVIYYDNDFVVINDL
YPKSAVHTLLLPRSPTHSQQHPFEAFEDAEFLAKVQAEATKLRKLVAKELQRQFGKYSAA
DKLREAVLSGQVELQDGEDLPAGRDWEREVKVGIHAHPSMSDLHVHVISRDMSSDCMRHR
KHYNSFNTPFLVDVADFPLAEDDPRRHPGRAGYLNSDLVCWRCGQNFGNKFKQLKDHLAE
EFEQWKRE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgacagattcggataatgaagatgccattacaaaagaggagattgctggtgaa
gcttcagcaccaccaccaaccaaagccggactcaccaagaccactacaaaaagcaatgca
tgcatgtcattatgtttcccagtcttggcgatgaatactaagatattttcagtcacagaa
ctcatgagaccaaagccaaaagtccctgctcagtcgaaaacctcatcttccaaggcatcc
accgcagggcacagcttcaagaacagggccgggctaggactatacactcacgaccctgct
gcctttccttcaagtcgggtcatttactatgacaatgactttgtcgtgatcaatgacttg
tatcccaaatcggcagttcatacgctcttgctgccgaggtcaccaacgcatagccagcag
cacccattcgaagcttttgaggatgccgagttcttggccaaagtccaagccgaagccacc
aagctgcgaaagctggtagcaaaggaactacaacgccaatttggaaaatacagcgcagcg
gacaagctgcgcgaagcggtcctgagcggccaagttgaactacaagatggtgaggatcta
ccggctggccgcgactgggagcgcgaggtcaaggtcggcatccatgcgcacccaagcatg
agcgacttgcacgtccacgtaatctcgcgcgacatgtcgtccgactgcatgcggcatcgc
aagcactacaactcgttcaatacgccgtttctcgtcgacgtggccgatttcccactcgcc
gaggacgacccccggcgtcacccaggtcgcgccggatacctcaatagcgatctcgtgtgt
tggcggtgcggacagaactttggcaacaagttcaaacagttgaaggatcacttggcagag
gagtttgagcaatggaaaagagaataa
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