Pestalotiopsis fici: PFICI_08021
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Entry
PFICI_08021 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03013
Nucleocytoplasmic transport
pfy03015
mRNA surveillance pathway
pfy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFICI_08021
09122 Translation
03013 Nucleocytoplasmic transport
PFICI_08021
03015 mRNA surveillance pathway
PFICI_08021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_08021
03041 Spliceosome [BR:
pfy03041
]
PFICI_08021
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PFICI_08021
Spliceosome [BR:
pfy03041
]
Common components
Common spliceosomal components
Cap binding complex
PFICI_08021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
19273034
NCBI-ProteinID:
XP_007834793
UniProt:
W3X502
LinkDB
All DBs
Position
Unknown
AA seq
201 aa
AA seq
DB search
MRGGFRNTVERLDRPSAYYQSRNNKRRRNDRGRDDRDGDAEMIDQKPEDKPEEDPLANAT
TLYVGNLSFYTTEEQVYDLFSKCGEIKRLIMGLDRFQKTPCGFCFVEYYTHQDALDCLKY
IGGTKLDERIIRTDLDPGFEEGRQYGRGKSGGQVRDEYRDDFDEGRGGLGRAIQSERMRD
NERDREHDKDEQMEKDYGRLR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtggtttcagaaacacagtcgaaagactggaccgccccagcgcctactatcag
agcaggaataataagcgcaggcggaatgatcgcggccgcgacgacagagatggagacgcg
gagatgattgatcagaaaccagaggacaagcctgaagaagaccctcttgctaacgccacc
acattatatgttggcaatctttctttctatacaactgaagagcaggtctatgatctcttt
tccaaatgcggcgaaatcaagcgtctcatcatgggtcttgaccggttccagaaaacgcca
tgcggcttctgcttcgtagagtactacacgcatcaggacgcattagactgcctcaagtac
attggcggcacgaaactggacgagcgtatcatcaggacggatctggatccgggctttgag
gagggccgacagtacggtcgtggcaagtcgggcggtcaagtgcgcgatgagtaccgagat
gactttgacgaaggccgtggtggtcttggccgtgccatccaatccgagagaatgagagac
aacgagcgggaccgcgagcatgacaaggatgagcagatggagaaggactacggcaggctg
agataa
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integrated database retrieval system