Pestalotiopsis fici: PFICI_08608
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Entry
PFICI_08608 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_08608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_08608
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PFICI_08608
mRNA degradation factors
5'-3' decay
Lsm complex
PFICI_08608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DJR-like_dom
Motif
Other DBs
NCBI-GeneID:
19273621
NCBI-ProteinID:
XP_007835380
UniProt:
W3WY49
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MENLTIHDTPPPGQGTPQGQFPTQALGGRAPPPPQPQQLPPQMFTTAAQLLDLTDKKLVI
CLRDGRKLTGILRSWDQFANLVLQSTVERIYTPLQDAPEDSPVKGYYADKTHGIFLVRGE
NVLLLGEIDLDKDDDMPAGFEEKEWKVVENMIKEKRAAEKVKEKKKLKKLATLGFEGENM
GEILL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctcacgatacacgacacgccgccgcctgggcagggaacgccccaaggccaa
ttcccaactcaagctctgggaggacgcgcccctccccctccccaaccccagcagctgccg
ccgcagatgtttaccactgccgcccagctgttggacttgacggataagaagctggttatc
tgcctacgcgacggaagaaagttgactggtatcctgcgaagctgggaccagtttgccaac
ctcgtcctccaatctacagttgagcggatatatacccctctacaagacgcccccgaggac
tcgcccgtcaagggctactacgctgataagacgcacggcatcttcctcgtgcgcggcgaa
aacgttctgctcctcggcgagatcgatcttgacaaggacgacgatatgcccgccggcttt
gaggagaaggagtggaaagtggtggagaacatgatcaaggagaaaagagccgccgaaaag
gtcaaggagaagaagaagctcaagaagctggccacgcttggctttgagggcgagaacatg
ggcgagatccttctctag
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