Pestalotiopsis fici: PFICI_08626
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Entry
PFICI_08626 CDS
T04924
Name
(RefSeq) ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfy03041
]
PFICI_08626
Enzymes [BR:
pfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PFICI_08626
Spliceosome [BR:
pfy03041
]
Complex C
Other components
Complex C specific factors
PFICI_08626
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_30
Cas3-like_C_2
AAA_19
nSTAND3
T2SSE
AAA_7
AAA_23
AAA_29
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
19273639
NCBI-ProteinID:
XP_007835398
UniProt:
W3WY37
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MAADLELGSSFIPSLHKPSALLPIAKHKDSLLYLVETNQVTIVVGQTGSGKTTQIPQFLA
EAGWCEDGKIVGITQPRRVAATTVAIRVAEEVGCELGKEVGFSIRFEDVTSAATKIKFLT
DGLLIREALVDPLLSRYSVIMVDEAHERSISTDILLGLLKKILKRRPDLRVIISSATLQA
EEFLAFFSSSANDDEVVGNTGTGQKGSIISIEGRTFPIDVLYLESPTEDYVEKALTTVFD
IHTKEGEGDILVFLTGRDEIDNAVAAISERAADLQPGTQSILVLPLYAGLTTEQQMYVFD
EAPQNTRKVIVATNIAEASVTIDGIVYVVDCGFVKLRTYDPRTGIETLTATPVSQASASQ
RAGRAGRTKPGKCFRLYTEENFQALPAANIPEIQRTNLAPFVLQLKALGIDNVVRFDYLT
PPPAELLVKATELLFSLGALDDYAKLTRPMGIRMAELAVEPMMAKTLLMAASFGCLSEIL
TIAAMTSLGGSIWIQRDGEKKQMESARRKFAAEEGDHLTLLNVYQTFVTKGKKEAKFCYE
NQLNFKAMSRAVSIRAQLKRYLERFGISENLTTTTLDKGEQIRRCLTTGYFAHAAKMQPD
GTFRNVEGGVVFHAHPSSLMFNRKAEWVIFHEIMETGEKTFIRDITKIEKQWLLEYAADF
YQVKP
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaccttgaactaggctcaagcttcatcccttctctgcataaaccttcggcg
ctgctgccgattgctaagcataaggacagtcttctttacttggtcgaaacaaaccaggtc
accatcgtcgttggccagactggaagtggtaaaacaacacagataccgcaattccttgcc
gaagcaggctggtgcgaggatggcaagatcgttggtatcacccagccgagacgggttgcg
gctaccaccgtcgccatcagggtcgcggaagaagttggctgcgagctgggcaaggaggtc
ggcttttccatccgattcgaggatgtgacttcggccgcaacaaagatcaagttcttgact
gacggcctcctcattcgagaagctctggtcgatcccctcctctcccgttattccgtcatc
atggtggatgaggcccacgagaggtcgatcagtaccgacattcttctaggtctgctcaag
aagattctcaaacgccggcccgatttgcgtgtcatcatcagcagtgccacgcttcaagct
gaagaattccttgcgttcttctcttcgtcagcgaatgacgacgaggttgtcggaaacacc
ggtacgggccaaaaaggctcgatcatcagcattgaaggcaggacatttccgattgatgtc
ctctacctcgaatcgccaactgaggactatgtcgagaaggctttaacaacagtctttgac
atccacaccaaggaaggcgagggcgacatcctcgtctttttgactggtcgcgacgagatt
gataatgcagttgcggcaatttcggagagggctgctgatttgcagcctggaacacagtca
atactggttctgccactctacgctggactgactacagaacagcagatgtacgtctttgac
gaggcgccgcagaacaccaggaaggtcattgttgcgacaaatatcgctgaagcttccgtc
accattgacggcattgtctatgtagttgactgcggtttcgtcaaacttcgcacctatgac
cctaggacaggcatcgaaaccttgacagcgactccagtctcccaagcgtcagcgtctcag
cgagctggaagagcaggtcgaaccaagcccggaaagtgcttccgcctctacactgaagaa
aatttccaggcgctcccggctgcgaacataccagagatccaaagaacaaatcttgcaccg
tttgttttgcagctcaaagctcttggaatcgacaacgttgtccgttttgattatttgacg
cctcctccggccgagctcttggtcaaagccaccgagcttctattctctctgggggcgcta
gatgactatgcaaagttgacacgtccaatgggaatacggatggccgagctagcagtcgaa
ccaatgatggcaaaaacattgctaatggccgcttcattcggctgtctcagtgagattctc
accatcgccgccatgacgagcttgggcggctccatctggatccagcgagatggggagaag
aaacagatggagtcagcaagacgcaagtttgccgccgaggagggtgatcatctcactttg
ttgaatgtctatcaaacgtttgtgacaaaggggaagaaggaagccaagttctgctatgag
aatcaactgaacttcaaggcaatgagccgcgcggtgagcattcgtgcacagctcaagaga
tatctcgaacgattcggaatctctgagaacctcacaaccacaactttggacaagggcgag
cagataagacgctgcctcacgacggggtattttgctcatgccgccaagatgcagccggac
ggcacctttcgaaacgtggaaggcggagtcgttttccatgctcaccccagctctctcatg
ttcaatcgaaaagcggaatgggttatcttccacgagatcatggaaaccggggagaagact
tttatccgagatatcaccaagattgagaaacaatggcttctagagtacgcagctgacttt
tatcaagtaaagccctga
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