Pestalotiopsis fici: PFICI_09452
Help
Entry
PFICI_09452 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_09452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_09452
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PFICI_09452
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PFICI_09452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
PCB_OB
Motif
Other DBs
NCBI-GeneID:
19274465
NCBI-ProteinID:
XP_007836224
UniProt:
W3X0P0
LinkDB
All DBs
Position
Unknown
AA seq
207 aa
AA seq
DB search
MAQTIAVPGQLLGPANKYIAGAGTHIQDSNLYASLLGTVAIEEPEKAPGPAKRLTKIEAL
QTPATLPTISVSRSGISEKREVLPEVGNIVLCRVTRIQPRQATVAILVVGETVLEAEWQG
VIRSQDVRATEKDKVKIYESFRPGDIVRAQVISLGDQANYYLSTASNELGVIMATSEAGN
SMFPVSWKEYRDAETGLSESRKVAKPF
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaacgatcgcagttccaggtcaacttctcgggcccgcaaacaagtacatagct
ggcgccggcacccacattcaggactcaaatctgtatgcgtcgctcctaggcacagtcgcc
attgaggagcccgagaaggcgcccggccccgccaaacgcctgaccaagatcgaggccctt
cagactcctgctacccttcccacgatatcagtctcgcgctccggcatctctgagaaacgt
gaggtgctgcccgaagttgggaacattgtgctgtgccgtgtgacacggatacagccccgt
caagcgactgtcgcaattctggtcgtgggcgagactgtgctcgaggccgagtggcaaggc
gtcattcgctcgcaggatgtcagggctacagagaaggacaaggtcaagatatacgagagc
ttcagaccgggtgatatcgtaagagcgcaggtgatttctttgggtgaccaagccaactat
tatctttcaactgcgagcaacgagctcggcgtcatcatggccacgagcgaagcgggtaac
tccatgttcccagtcagctggaaagagtatagagacgccgagacgggactcagcgaaagc
cgcaaggttgcaaagccattttga
DBGET
integrated database retrieval system
