Pestalotiopsis fici: PFICI_09460
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Entry
PFICI_09460 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_09460
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
PFICI_09460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
DUF4355
DUF7524
Rrp44_CSD1
DUF5774
Motif
Other DBs
NCBI-GeneID:
19274473
NCBI-ProteinID:
XP_007836232
UniProt:
W3X2I1
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MEQQNNQQQQQPPAGGVPGPTGRRLHIAHRRSPSELTPLVSMFANPGMEQLAIQQQIELL
QQQQQQLQATHQYINMGMMPPGQIAPGGFNPMQQGINMAQQGFQFPNQLPQQQNVQLGAP
SQPMSHRRNQSALPNMGMGPPPAPSSGASGSTFGHFDNSQPSGRENASRGGRGGPPAGGG
HQRRHSLALADAKKAAEIAQQKRTTSGFSFPGPNASDSAPADDAKPAATTTTDTPIAQGS
SASSRGGRGHGRSQSMAVGANGRGHGRGSGSISIGNEGGQGSDFGSRGRGGHARTSSRNF
DGNWRTQSQTQGQDQSGGQQSFQPGHRSRASMSQSISGVGAFQYPGQPQMVQVPGQMPMM
QMYPGQLNPMQLNQLQALQAAQMNGQHLVGLQGSQHAPQLSGQANQQQQRKTLFTPYLPQ
ATLPALLGDGQLVSGILRVNKKNRSDAYVSTTDGLLDADIFICGSKDRNRALEGDLVAVE
LLDVDEVWGQKREKEEKKKRKDITDTRSGSTAGTSQSGSANAEDAGAGEGGIRRRGSLRQ
RPTQKKNDDVEVEGQSLLLVEEEEISDEAKPLYAGHIVAVIERVAGQMFSGTLGLLRPSS
QATKEKQEAERAARDGGRPQEHSRQQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQ
DYADRIFVACIKRWPITSLHPFGTLVEQLGKMGDLKVETDALLRDNNFSSDEFSDAVLRS
VSLQDWSLAKEDEDAIATRRDFRSETTFTLDLAGTGELGNAVHVKTESDGKIEIGIHVPD
IAHFVKANSLVDREAKKRGTAVHLVNRTCALLPPQIANEVCTLTPGEDRLTVSVVFRVNP
QTGAVAEGDTWIGRSIIKSSAKLSLEQIDDALTGQSTFKHETVQAKDVQILNAVAQKFRE
ARLGSEDEPIAPLRLLHQLDDENIPIKHNLFDSTSGTELVEELQHKVNAYVAQRLAQDLP
EKALLRRQGAPNARRLQTFVERMRAIGYDFDTTSSGTVQNSLFKVDDNDIRKGMETALVK
SMNHAKYYISGKTNKLLWPHYALNLPLYTHFTAPTRRYADLVVHRQLEAVLSEGKIEYTE
DVDNLVKTVESCNTKKESAQNAQEQSIHIESCRIMDRKRQEVNGDLISEGIVLCVYESAF
DVLIPEWGFEKRVHCDQLPLKKAEFRKEKRVLELYWEKGVPSSAYVPEDERPKAHQSQRV
SNAMAAAKQAEEAEKARKEREEAARKQTETGTISTDDVDALFDDDEDNMSDVTESMAGAS
LAERPTQSVPGSPTRSTSNTGVLHRTRSDSKVPMAEAVETRLTNKEKYLKLFALREEGGE
YIQDVTEMTRVPIILKTDLSKSPPCLTIRSLNPYAL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagaacaaccaacagcaacagcagcctcctgctggcggcgtaccaggccca
actggtcgtcgtctgcacattgctcaccgtcgaagcccctccgagttgacgcctttggtg
agcatgtttgcgaaccctggaatggagcagcttgctattcaacaacagatcgagcttcta
cagcagcagcagcaacagttgcaggctacacaccaatacatcaacatgggtatgatgccg
cccggacagattgctcctggtggcttcaaccctatgcaacagggtatcaacatggcgcag
cagggcttccagttcccgaaccagcttccacagcaacaaaatgttcaactgggagctccg
agtcagcccatgtcacatcgccgtaatcagtcggcactccccaatatgggcatgggcccg
cctcccgctccttcatcgggagcttccggttcgacttttggccatttcgataactcgcag
ccatccggacgagagaacgcttcccgaggagggcggggcggccctccggccggaggtgga
catcagcgacgacactccctagctcttgctgatgccaagaaggctgccgagatcgctcag
cagaagcgaaccacgtcgggcttttctttcccaggccccaatgcctcggacagtgccccg
gcagatgatgctaagcctgcagccaccacaactaccgatacccctattgcccagggctcc
tcggcatcttctcgaggtggccgcggtcacggacgcagccagagcatggcagttggtgcc
aacggtcgaggacatggccggggctctggttccatttctatcggtaacgagggtggtcag
ggcagcgactttggcagccgaggccgtggcggacacgccagaacctcatccagaaatttt
gatggcaactggcgaactcagtctcagactcaaggccaggaccaatccggtggccagcag
tctttccagcctggccatcgatcccgtgcatcgatgagccagtcgatttcgggcgttgga
gccttccaatatcccggtcagccgcagatggtgcaggttcccggtcagatgccgatgatg
cagatgtaccctggccagctcaaccccatgcagctgaatcagctgcaagctctccaggcc
gcacaaatgaacggccaacatctggttggtcttcaaggaagccaacacgctcctcaactg
agcggccaagcgaaccagcagcagcaaaggaagactctcttcacaccttacctcccgcaa
gcaactcttcctgcactgctcggcgatggtcagcttgtctctggtattctgcgtgtcaac
aagaagaaccgtagcgatgcatacgtctcgaccactgatggcctccttgatgccgatatc
tttatttgtggtagcaaggaccgcaaccgagctctggagggcgatctcgtcgctgtagaa
ctgttggatgtcgatgaggtatggggccagaagcgtgagaaggaggagaaaaagaagcgc
aaggacatcactgatacgcggtccggatctaccgccggtacaagtcagtccggatctgct
aacgccgaggacgccggcgcgggtgagggcggcattcgccgccgtggcagtctgcgccag
cgccctactcagaagaagaacgatgatgtcgaggttgagggtcagagtctgcttcttgtc
gaagaggaggagatcagcgatgaggccaagccgctctatgctggccacattgttgccgtc
attgagcgcgttgccggtcaaatgttctcgggtactcttggtttgctgcgcccgagtagc
caggccaccaaggagaagcaggaggctgaacgtgccgccagagatggtggccgtcctcag
gagcactcgcgccagcaagacaagcccaagattgtttggttcaagccaaccgacaagcgt
gttcccctgattgccattcccacggagcaggcccctcgcgactttgttgagaagcaccag
gactacgccgatcgcatctttgttgcgtgcatcaagcgttggcctatcacatctttgcat
ccttttggaactttggttgagcagctcggcaagatgggtgaccttaaggtggaaaccgat
gctctgctccgtgacaataacttctcgtctgacgaattctcggacgccgttcttcgcagt
gtcagccttcaggactggtcgcttgcaaaagaggacgaggatgccattgctacccgccgg
gatttccgcagcgagacgactttcactctcgacttggcaggaactggagagctgggaaat
gctgtccatgtgaagaccgaatcggatggaaagatcgaaattggtatccacgtgccggat
attgcacactttgtcaaggccaattcccttgttgaccgtgaggctaagaagcgcggcacc
gcagttcatctggtaaaccgaacttgtgcacttctgccacctcagattgccaatgaagtc
tgcactttgaccccgggcgaagacagactgactgtcagtgttgtgttccgcgttaacccg
cagaccggcgctgtcgcagaaggcgacacctggattggtaggagtatcatcaagagctct
gccaagctctctttggaacagattgacgatgccttgacaggtcaatctaccttcaagcac
gagaccgttcaagccaaggacgtccagatcctgaacgctgttgctcagaagttccgggaa
gcccgacttggctccgaagatgagcctatcgctcctctcaggctcctccatcaattggat
gatgagaatattcctatcaagcataacctatttgattccacatctggtaccgagctcgtc
gaggagctgcagcacaaggtcaatgcttacgtcgctcaacgccttgctcaggatctaccg
gagaaggccctgctccgacgtcaaggcgccccgaacgcacgccgtctgcaaacctttgtg
gagcgcatgagggctattggatacgactttgacaccactagcagtggtactgtccagaac
agcctcttcaaggttgatgacaatgatattcgcaagggtatggagactgcgctggtcaag
agcatgaaccacgccaagtactacattagtggtaaaaccaacaagctgttgtggccgcac
tatgcactaaacctgcctctgtacactcattttactgcacctacccgccgctacgccgac
ctagttgttcatcgacagctcgaggctgtcctttccgagggcaagatcgagtacaccgag
gatgttgacaacttggtcaagacggttgagtcttgcaacaccaagaaggagtctgcccag
aatgctcaggagcagagcattcacattgagtcatgccgcatcatggacaggaagcgccaa
gaggtcaacggtgacctcatcagcgagggtattgtcctatgtgtttacgagtcggccttt
gatgtcttgattcccgagtggggctttgagaagcgtgtccactgcgaccagctgccactc
aagaaggcagagttccgaaaggagaagagagttctggagctgtactgggagaagggcgtc
cccagctctgcatatgtccccgaggacgagagacccaaggcacaccaatcccagagagtg
tccaatgccatggcggctgcaaagcaagccgaagaggccgagaaggccagaaaggagcgc
gaggaagctgctcgaaagcaaaccgagactggtaccatttctaccgatgatgttgacgca
ctgttcgacgacgatgaggacaacatgtcggacgtgacagagtccatggcaggtgcatct
cttgctgagcgtcccacgcaaagcgtgcctggttcgccgactcgatccacctccaacact
ggagtcttgcatcgcactcgatctgactcaaaggtccccatggctgaagctgtcgagacg
cgcttgaccaacaaggagaagtacctcaagttgttcgccctgagagaggaaggtggagag
tacatccaagatgtcacggaaatgacgagagtgcccatcattctgaagacggacctctcc
aagagcccaccgtgtttgactattcgctcgctcaacccttacgctctgtag
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integrated database retrieval system
