KEGG   Pestalotiopsis fici: PFICI_09633
Entry
PFICI_09633       CDS       T04924                                 
Name
(RefSeq) Replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03030  DNA replication
pfy03410  Base excision repair
pfy03420  Nucleotide excision repair
pfy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFICI_09633
   03410 Base excision repair
    PFICI_09633
   03420 Nucleotide excision repair
    PFICI_09633
   03430 Mismatch repair
    PFICI_09633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfy03032]
    PFICI_09633
   03036 Chromosome and associated proteins [BR:pfy03036]
    PFICI_09633
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_09633
DNA replication proteins [BR:pfy03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    PFICI_09633
  DNA Replication Termination Factors
   ELG1-RFC complex
    PFICI_09633
Chromosome and associated proteins [BR:pfy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    PFICI_09633
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     PFICI_09633
  Check point factors
   HRAD17(Rad24)-RFC complex
    PFICI_09633
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND3 AAA_16 AAA_22 RCF1-5-like_lid RuvB_N DNAX_ATPase_lid Viral_helicase1 AAA_3 Rad17 Mg_chelatase AAA_assoc_2 Gp44_lid MeaB NTPase_1 AAA_5 AAA_11 KTI12 AAA_19 AAA_24 AAA_18
Other DBs
NCBI-GeneID: 19274646
NCBI-ProteinID: XP_007836405
UniProt: W3X135
LinkDB
Position
Unknown
AA seq 357 aa
MPAVQKDEIGESSTSAAKKALNASANGAATYELPWVEKYRPIFLDDVVGNTETIERLKII
AKDGNMPHVIISGMPGIGKTTSVLCLARQLLGDSYKEAVLELNASDERGIDVVRNRIKGF
AQKKVTLPAGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQS
RCAILRYARLTDGQVVKRLMQIIEAEKVQYSDDGLAALVFSAEGDMRQAINNLQSTFAGF
GFVSGDNVFKVVDSPHPIKVQAMLKACYEGKIDSAMDSLRELWDLGYSCHDIISTMFRVT
KTIPTLSEHSKLEFIKEIGFTHMKILEGVQTLLQLSGCVARLCKINMDPKRFETKLK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcctgccgtacaaaaggacgaaattggcgagtcgtcgacatcagcagccaagaaggct
ctcaacgcctcggccaatggagccgccacctatgaacttccatgggtagaaaagtacaga
cccatcttcctcgatgatgtcgtaggcaacacggagacgatcgagcgactcaagattatc
gccaaggacggcaacatgccccacgtcatcatatcaggaatgcctggaatcggaaagacg
acgagcgtgctatgtctggctcggcaactcctgggcgattcctacaaggaggctgtcttg
gagctcaatgcatccgacgagcgtggtatcgacgttgtgcgcaacagaatcaagggcttt
gcacagaaaaaagttaccctgccggcaggcagacacaagctcgtgatcctcgacgaggcc
gacagcatgacgagtggtgcgcagcaagccctgcggcgaaccatggagatctactcaaac
acaacgcgcttcgcctttgcctgcaaccagagcaacaagatcattgagccgctacagtcg
agatgcgccatcctgcgatacgcgcgactgacagatggacaagtcgtcaagcgactcatg
caaatcatcgaggcagaaaaggtgcagtacagcgacgacgggctggcggctctcgtcttt
agcgccgaaggtgatatgcgacaagcaatcaacaacctccagtccacgtttgcaggtttc
ggcttcgtcagtggagacaatgttttcaaggtcgtcgactcgccgcaccctatcaaggtg
caggccatgcttaaggcttgctacgagggcaagattgacagcgccatggatagcctccgt
gagctgtgggatcttggctacagctgccacgatatcatcagcaccatgttccgggtcacc
aagacgataccgacactgagcgagcatagtaagctcgagttcatcaaagagattggcttc
acacacatgaagatcctcgaaggcgtgcaaaccttgctccagctcagcggttgtgtggct
cgtctatgtaaaatcaatatggacccaaaacggtttgaaacaaaactaaagtag

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