Pestalotiopsis fici: PFICI_09633
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Entry
PFICI_09633 CDS
T04924
Name
(RefSeq) Replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03030
DNA replication
pfy03410
Base excision repair
pfy03420
Nucleotide excision repair
pfy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFICI_09633
03410 Base excision repair
PFICI_09633
03420 Nucleotide excision repair
PFICI_09633
03430 Mismatch repair
PFICI_09633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfy03032
]
PFICI_09633
03036 Chromosome and associated proteins [BR:
pfy03036
]
PFICI_09633
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_09633
DNA replication proteins [BR:
pfy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PFICI_09633
DNA Replication Termination Factors
ELG1-RFC complex
PFICI_09633
Chromosome and associated proteins [BR:
pfy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PFICI_09633
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PFICI_09633
Check point factors
HRAD17(Rad24)-RFC complex
PFICI_09633
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
nSTAND3
AAA_16
AAA_22
RCF1-5-like_lid
RuvB_N
DNAX_ATPase_lid
Viral_helicase1
AAA_3
Rad17
Mg_chelatase
AAA_assoc_2
Gp44_lid
MeaB
NTPase_1
AAA_5
AAA_11
KTI12
AAA_19
AAA_24
AAA_18
Motif
Other DBs
NCBI-GeneID:
19274646
NCBI-ProteinID:
XP_007836405
UniProt:
W3X135
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MPAVQKDEIGESSTSAAKKALNASANGAATYELPWVEKYRPIFLDDVVGNTETIERLKII
AKDGNMPHVIISGMPGIGKTTSVLCLARQLLGDSYKEAVLELNASDERGIDVVRNRIKGF
AQKKVTLPAGRHKLVILDEADSMTSGAQQALRRTMEIYSNTTRFAFACNQSNKIIEPLQS
RCAILRYARLTDGQVVKRLMQIIEAEKVQYSDDGLAALVFSAEGDMRQAINNLQSTFAGF
GFVSGDNVFKVVDSPHPIKVQAMLKACYEGKIDSAMDSLRELWDLGYSCHDIISTMFRVT
KTIPTLSEHSKLEFIKEIGFTHMKILEGVQTLLQLSGCVARLCKINMDPKRFETKLK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgtacaaaaggacgaaattggcgagtcgtcgacatcagcagccaagaaggct
ctcaacgcctcggccaatggagccgccacctatgaacttccatgggtagaaaagtacaga
cccatcttcctcgatgatgtcgtaggcaacacggagacgatcgagcgactcaagattatc
gccaaggacggcaacatgccccacgtcatcatatcaggaatgcctggaatcggaaagacg
acgagcgtgctatgtctggctcggcaactcctgggcgattcctacaaggaggctgtcttg
gagctcaatgcatccgacgagcgtggtatcgacgttgtgcgcaacagaatcaagggcttt
gcacagaaaaaagttaccctgccggcaggcagacacaagctcgtgatcctcgacgaggcc
gacagcatgacgagtggtgcgcagcaagccctgcggcgaaccatggagatctactcaaac
acaacgcgcttcgcctttgcctgcaaccagagcaacaagatcattgagccgctacagtcg
agatgcgccatcctgcgatacgcgcgactgacagatggacaagtcgtcaagcgactcatg
caaatcatcgaggcagaaaaggtgcagtacagcgacgacgggctggcggctctcgtcttt
agcgccgaaggtgatatgcgacaagcaatcaacaacctccagtccacgtttgcaggtttc
ggcttcgtcagtggagacaatgttttcaaggtcgtcgactcgccgcaccctatcaaggtg
caggccatgcttaaggcttgctacgagggcaagattgacagcgccatggatagcctccgt
gagctgtgggatcttggctacagctgccacgatatcatcagcaccatgttccgggtcacc
aagacgataccgacactgagcgagcatagtaagctcgagttcatcaaagagattggcttc
acacacatgaagatcctcgaaggcgtgcaaaccttgctccagctcagcggttgtgtggct
cgtctatgtaaaatcaatatggacccaaaacggtttgaaacaaaactaaagtag
DBGET
integrated database retrieval system