Pestalotiopsis fici: PFICI_10296
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Entry
PFICI_10296 CDS
T04924
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFICI_10296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfy03000
]
PFICI_10296
03021 Transcription machinery [BR:
pfy03021
]
PFICI_10296
Transcription factors [BR:
pfy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PFICI_10296
Transcription machinery [BR:
pfy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PFICI_10296
RNA polymerase III system
TFIIIB
PFICI_10296
RNA polymerase I system
SL1/TIF-1B
PFICI_10296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
19275309
NCBI-ProteinID:
XP_007837068
UniProt:
W3WWT0
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MEGIQTHPATAAQAMAFTAPGSLSFPGGAHELTPPASDPAKRPTNGQPAGAVNGAGVTPA
TPAATPAATQGGSGLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRE
PKTTALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKF
PIRLEGLASRHHNFSSYEPELFPGLIYRMIKPKVVLLIFVSGKIVLTGAKVREEIYQAFE
MMYPVLQDFRKV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggagggtattcagactcaccccgctactgccgcgcaggccatggccttcacggccccg
ggttcactgtcgttccctggcggtgcgcatgagctcactccccctgccagcgaccctgcc
aagcgacctaccaacggccaacctgctggtgctgtcaatggtgctggagtgactcccgca
accccggctgccactcctgctgcaactcaaggtggtagtggtttgacacctacccttcag
aacattgtggctactgtcaacttggactgccgcttggatctgaagaccattgctctgcac
gcccgcaatgctgagtacaaccccaagcgtttcgctgccgtcattatgcgtatccgtgaa
cccaagaccaccgctcttatctttgcctctggcaagatggtcgtcaccggtgccaagtct
gaggacgacagcaagcttgcttcgcgcaaatatgcccgaattatccagaagcttggcttc
aacgccaagttcactgatttcaagattcagaacattgtcggcagttgcgacatcaagttc
cccattcgtcttgaaggtttggcttcgcgccaccacaacttcagctcctacgagcctgaa
ttgttccccggtctcatctaccgcatgatcaagcccaaggtcgtcttgctcatctttgtt
tctggcaagatcgtcctgacgggtgccaaagtcagagaggaaatttaccaagcctttgag
atgatgtaccctgtcttgcaagatttccgcaaggtttag
DBGET
integrated database retrieval system