Pestalotiopsis fici: PFICI_10944
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Entry
PFICI_10944 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PFICI_10944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfy03041
]
PFICI_10944
Spliceosome [BR:
pfy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PFICI_10944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
19275957
NCBI-ProteinID:
XP_007837716
UniProt:
W3WT89
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSKRLASEALEEEPLGSIGSPASKKSRFDDGPAELLNGGLNGNGATPTQRDGQGEDEDDF
EDEVQEKAPIRQAAPTAGYDDLYLDTIDRNVLDFDFEKLCSISLSNINVYACLVCGKYFQ
GRGPKSHAYFHALDEGHHVFINMQTQSVYVLPEGYEVKSKSLDDIKYVSDPRYTKQEVMD
LDRKPRRAWTLGGKEYTPGFVGMNNIKENDYLNVVVQALSHVAPLRNFFLLEDMSSKSEL
AKRCSILFRKIWNPRAFKNHVSPHELLQEISLRSNKRFTLTTQSDPVEFLSWFLNNLHLG
LGGSKTKPGSSIVQRIFQGKLKVESQDITARADVGDRLRFEEAAEVKADINRFLLLTLDL
PAAPLFQDELERNIIPQVPLTTILSKYDGMKGQEHLSQRKRYRLMHPLPPYLIFHIKRFS
TNKFVSERNPTIVTFDARNLDVSPYVEPNPAEHPPGEPIWYDLVANVVHEAVRAKEDVAD
TAEEKKTWKVQLRDKGRDEWVTCQDLFVENTEKELLYLGESYLQIWERRREPKGKGKA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcggctagcatcagaagctctagaagaggagccgcttggcagcattggatcg
cccgcatccaagaaatcgaggttcgatgacggacccgcagaactgctgaatggcgggctg
aacggcaacggtgcaacaccaacacaacgcgacgggcaaggtgaagacgaggacgatttc
gaggatgaggtgcaagaaaaggctccgatacggcaagcggcccccactgccggctacgac
gatctctacctcgacaccatagaccgcaacgtgctcgactttgactttgagaagctctgc
tccatcagtctgtccaacatcaacgtctacgcctgcctagtgtgcggcaagtacttccag
ggccgcggtcccaaatcgcacgcctacttccacgcgctggacgagggccaccatgtcttt
atcaatatgcaaacgcagagcgtctacgtgctgcccgagggatacgaggtcaagagcaag
tcgctggacgacatcaagtacgtgtcggacccacgctacacgaaacaagaagtcatggat
ttagatcgcaagcccagacgcgcgtggacacttggtgggaaggagtacacgccgggcttt
gtgggcatgaacaatatcaaggagaacgactacctcaacgtggtggtacaggcgctgtcg
cacgtcgctcccctgaggaatttcttcctgctcgaagacatgtcgtccaagtcggagctg
gcaaagcgatgcagtatcttgtttaggaaaatatggaatcctcgggcattcaagaatcac
gtctcgccgcacgagcttctgcaggaaatctcgctgcggtcaaacaaacgcttcaccctg
acgacacagtctgatcccgtcgagtttctatcgtggttcttgaataacctgcacttggga
ttgggaggaagcaagacgaaacctggaagcagtatcgtacaacgcatttttcagggaaag
ctcaaggtcgagtcacaagatattacagccagggcagatgttggagatcgtttgcggttt
gaggaggcagcggaagtgaaggcagacatcaaccgcttcctccttctgaccttggatctt
cccgctgcgcccctcttccaagacgagctggaacgcaacatcatcccccaagtaccgctg
accacgattctatcaaaatacgatggcatgaagggacaggagcatctctcacagcggaaa
cgctacagactgatgcaccctttaccaccatacttgattttccatattaagcgtttctcc
accaacaaatttgtgtcggagcgcaacccaaccattgttacattcgacgcacggaatcta
gacgtatcgccgtacgtggaaccaaacccggccgagcatcctcctggtgagcccatctgg
tacgatctggtggcaaacgtggtgcatgaagcagtacgagccaaggaagacgtggcagat
acagcggaagagaagaagacatggaaggttcaacttagggacaagggacgagatgaatgg
gtcacatgtcaggatctgtttgtggaaaatacagaaaaggagctgctctaccttggagaa
tcgtatctccagatctgggagaggcggcgcgaaccaaaaggcaagggcaaggcatga
DBGET
integrated database retrieval system