Pestalotiopsis fici: PFICI_11417
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Entry
PFICI_11417 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFICI_11417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_11417
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFICI_11417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
19276430
NCBI-ProteinID:
XP_007838189
UniProt:
W3WUI9
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MSLFGTPAAGAPSSGGGLFGTPNTNTAAAPASTSLFSGLGGQNKPATGGLFGGAAASTTP
AASTTQPASGGLFGGATNTQTNTAGTGGLFGAANPNATSNTTGNTGTTGGLFGGATPAAQ
PSTGGGLFGGLNTQNKPASGGGLFGNSTAQPQSNTGGGLGGGLFGAAPASNQAPSTGALG
LAGLSNNNQAGQSLLGLGASQNPNAQSQAAPMGYFDSLLSKSKKRAEGEAPNDDLPTLQL
GLGDLRQKLRKLGPRSTDPLQSARAQYTLAASGMDPGAAVRDLNYFDIQAGRVERPITGP
AEIDVDTYLANLQQKTTLSMIADGLERSVRDFDNFLEDNVTEEWEAQRKRIYEHFGIKPR
DSPTDAPGAPRESLGGFGRSRRGKAGKSTVGGEKNSVFGRSNLQKSVIGTPSKIGPHQAE
FTDVENQSSKTNAISGSGSIDDRFLREKQGKLAERIRELNNARLQQRPFSILHELSQVES
ASGDRHAQNLVDAYHAVMCMTGEDPDAESFAENSTARERQFQKMYLDLQSNSPSSIQWRK
RVLKGSNEFLEKKFFDEVEALITKYPREANLGGRPDVVSKIKAYVRLRQNRKDLVPDNTQ
LQEVNKEYVWALVYYLLRSGHVTEAAEYVKEHATTFRSIDRTFSSYLLEYASSEDRRLRR
QLQERCNNEYTQRVRNAPENSIDPFRMACYKIVGRCEVANRNLEGLNTDIYDWIWLQFNL
ARENDKLTEMAGESYTLANLQETIREIVLRHFPKSPADDSNGQFGMSFFLQILAGMFEQA
IAYLYPFSYVDAIHFAIGLEFYGLLRPSDSWGNANELLTYNTRSQPQISFGRMLGYYTRD
FRAADVASAVDYFTLICLNADLEGEAGRSQVELCHLALRELVLETREFSKLIGDIRPDGH
RITGLVEERGPLIGLREEDDFIKAVTLQAARYADENGRTTDAVLLYHLAGDYDSVVTIVS
RALSEAISLDIGEDPMRLQPVKPRAAGKDDVQTGSSLSLAAIDDPIDLARTMMSMYEKDA
MFYTKIQDQNRSACHLLLQMSEIKGMVEANQWPESLDKIQALQILPLDARGDPSIIRQYA
SKFAGLSQPVAINIPNLLMWTITCCMNQRERLLSGQYSGNEGTRRIMVDNLKQISMDLTT
YTSQLKYRFPPHLHQALARASAD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctttggcacgccggctgctggcgcgcccagctcgggcggtggacttttcggc
actccaaacacaaacacggcggctgccccagcatcgacctcgctcttctcgggcctgggg
ggccagaacaaacccgctaccggcggtctctttggtggagctgctgcatcaacgactcct
gctgcatccacgacccagcccgcttcgggtggcctttttggcggcgccaccaacactcag
acgaacacggcaggcactggcggtttgtttggggccgcgaatcctaatgcgacttcgaac
acgactggaaacacgggcaccacgggtggacttttcggtggtgccacccctgctgctcaa
ccttccactggaggtggactattcggtggtctaaacactcagaacaagcccgcctctggt
ggtggcctctttggtaacagtacagctcagcctcaatcaaataccggtggcggactcgga
ggtggactctttggcgcagctccggcatcaaaccaggcgcctagtactggtgctcttggc
cttgccggtctttccaacaacaaccaagcaggacagagcctgctcggtctcggagcctca
cagaaccccaatgcccaatcgcaagccgctccaatgggctattttgatagtctgctgtca
aagagcaagaagcgtgccgaaggcgaggctccaaacgacgatctccctactctccagctg
ggtctgggcgacctgcgacaaaagcttagaaagcttggcccacgaagcaccgaccctctg
cagagcgccagggctcaatacaccctcgcggcctctggcatggacccgggagccgccgtt
cgagacctcaactactttgatatccaagccggccgtgtcgagcggcccatcacaggccct
gctgagatcgacgtcgacacataccttgccaaccttcaacaaaagactacccttagcatg
attgctgacggtctagagcgttccgttcgggactttgacaactttctcgaggacaatgtc
acagaagaatgggaagcacagcggaaacgaatctacgagcattttggcatcaagccccgt
gacagcccgacagatgcccccggcgcaccgagagagtctctcggtggatttggtcgatcc
cgcagaggcaaagccggcaagtcgacggtcggtggcgagaagaacagtgtgtttggtcga
tcaaatcttcaaaagtctgtcattggcacacctagcaaaattggtcctcaccaggccgaa
tttaccgacgtggagaaccagagctccaagacaaatgccatcagtggaagcggctcgatt
gatgaccgctttctccgggagaagcagggcaaactcgcagagcgcatcagggaactcaac
aatgctcgtttgcagcaaaggccgttctcaattctccacgagctgagccaggttgagagt
gcttcaggtgatcggcatgcccagaatttggtagatgcctatcatgccgtcatgtgcatg
acaggggaagacccagatgccgaatcttttgccgagaactccacagccagagaacgacag
ttccagaagatgtatctagatttgcaaagtaactcgcccagctccatccaatggcgcaag
agagttttgaagggctcgaatgagttcttggagaagaagttctttgacgaggtcgaggct
ctgatcaccaaatacccccgagaggccaaccttggtggtcgtccggatgttgtgagcaag
atcaaagcatatgtgcgactgcggcagaaccgaaaggaccttgtgcccgacaatacgcag
cttcaagaggtcaacaaggagtacgtctgggcactggtgtactatctcttgcgttctggt
cacgttacagaggccgcggagtatgttaaggagcatgctaccacgttccgcagcattgac
agaaccttttcctcatacttgctggagtatgcatcaagcgaagaccgccgtcttcgaaga
caattacaggagcgctgcaacaacgaatacacgcaacgtgttcgaaatgcccccgaaaac
agcatcgacccattcagaatggcttgttataagattgttgggcgctgtgaggttgcaaat
cgcaaccttgagggactaaacacggacatctacgattggatctggcttcagttcaacctc
gctagagagaatgacaaactgaccgagatggctggcgaatcatacacactggccaatctg
caggagaccattcgggagattgtcctcaggcacttccccaagtcaccagccgatgactcc
aacggacagtttggcatgtcgttcttccttcagattctggcgggcatgttcgagcaagct
attgcatacctataccccttttcttacgttgatgctattcactttgcgattggtctcgag
ttctacggtctcctacgtccttccgactcgtggggcaacgccaacgagcttctcacctac
aacacgagatcgcaaccccagatcagctttggaagaatgctcggatattacacaagggac
ttccgggcagcggatgtggcttcagccgttgattactttaccttgatctgtctcaacgcc
gacttggaaggcgaggctggaagatcgcaagtcgagctttgtcacttggcactacgtgag
cttgtcctcgagacacgggagttcagcaagttgattggtgatatccgccctgatggtcac
cgtatcactggattggtcgaagagcgtggccctctgatcggtctgagggaagaagacgac
tttatcaaggctgtgacactccaagctgctagatacgcagatgagaacggacgcacgacg
gatgcggttctcctctatcacctcgcaggcgactacgacagcgtcgtcaccattgtcagc
cgcgcgcttagtgaagcgatctcgctcgacataggagaagacccgatgcgtctgcaacca
gtcaaaccccgagccgccggtaaggacgatgtacagacaggcagcagtcttagtctcgct
gccattgatgacccgatagacctcgccaggacaatgatgtccatgtacgagaaggacgcc
atgttctacaccaagatccaggatcagaaccgcagcgcatgccaccttttgttacagatg
agcgagatcaagggcatggttgaggctaaccagtggccagaaagcttggacaaaatccaa
gcacttcagattctgccattggatgcacgtggtgaccccagcataatccgccaatacgcg
tccaaattcgccgggctatctcagccagtggccatcaacatacccaacctgctgatgtgg
acaatcacgtgctgcatgaaccagagggagaggctgttgagcggacagtacagcggtaac
gagggcacgcggcgcatcatggtggacaatctcaagcagatcagcatggacttgacgacg
tacaccagtcagctcaagtaccggttcccaccgcacttgcaccaagctctggctagagct
tcggctgattag
DBGET
integrated database retrieval system
