KEGG   Pestalotiopsis fici: PFICI_11502
Entry
PFICI_11502       CDS       T04924                                 
Name
(RefSeq) DNA-directed RNA polymerase
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pfy  Pestalotiopsis fici
Pathway
pfy03020  RNA polymerase
pfy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PFICI_11502
  09124 Replication and repair
   03420 Nucleotide excision repair
    PFICI_11502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfy03021]
    PFICI_11502
   03400 DNA repair and recombination proteins [BR:pfy03400]
    PFICI_11502
Transcription machinery [BR:pfy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PFICI_11502
  RNA polymerase III system
   RNA polymerase III
     PFICI_11502
  RNA polymerase I system
   RNA polymerase I
     PFICI_11502
DNA repair and recombination proteins [BR:pfy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PFICI_11502
SSDB
Motif
Pfam: RNA_pol_Rpb6 eIF3_subunit Pro_Al_protease
Other DBs
NCBI-GeneID: 19276515
NCBI-ProteinID: XP_007838274
UniProt: W3WQF7
LinkDB
Position
Unknown
AA seq 159 aa
MSDYGGDDDGRDDDVGGDEPMFEDEEDVVDDFDDEVPEEDEYGKTRAADEEENNVVVSGD
PSAQANRAKAGEKSHKDKKIPNEERSTTPYMTKYEKARILGTRALQISMNAPVLVDLEGE
TDPLQIAIKELREKKIPLIVRRYMPDGYYEDWTCEELLQ
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtctgactacggtggcgatgacgatggcagagatgacgatgtcggcggtgacgagccc
atgttcgaggacgaggaggatgttgtcgacgactttgatgacgaggtgcccgaggaagat
gaatatggcaagactcgcgcagccgatgaagaagagaacaatgttgtagtctcgggagac
ccttcggcacaggcaaaccgggcaaaagcgggcgagaagtcgcacaaggacaagaagatt
ccaaacgaggagcgatcaacaacaccatacatgacaaagtacgagaaggctagaatcctg
ggcacacgcgctctacagatcagtatgaatgcacccgtgttggtcgacctcgagggcgag
acggatcccctgcagattgccatcaaggagctgcgggagaagaagattcccttgatcgtc
cgccgttacatgcccgacggatactacgaggactggacctgcgaagagctgctgcaatag

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