Pestalotiopsis fici: PFICI_12091
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Entry
PFICI_12091 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
pfy
Pestalotiopsis fici
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfy03009
]
PFICI_12091
Ribosome biogenesis [BR:
pfy03009
]
Eukaryotic type
90S particles
Other 90S particles
PFICI_12091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_LRRK2
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR93
PEP5_VPS11_N
Beta-prop_IP5PC_F
TSLP
WDR54
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_Aladin
NOL11_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
19277104
NCBI-ProteinID:
XP_007838863
UniProt:
W3WSA6
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSSFFTVPGAQKKRKQAPTTADGPKKRFAGTGKPSGKATKAPPKAAPQNRRQERDDESIS
GSDSEDDNVAADDEEAQDSGSDSEREGETAAEKRLRLAERYLERVRQQEEMAVGFNAEDV
DRDIIAERLKEDVAVFKGKVFRQLADELATDKASHCLFRADTLTTTNITTCAPFCYTASK
DRTIIKWRIQDLPKYQYPQKTKKKPKKQAPPKKRPEKVAVIKPSKSKDKDFQGHVAGEIL
CIAASQDGKFLVTGGTDRRLCVYDANTMKPLKAWTHHRDAVTALVFRRGSNQLYSASKDR
TVKVWSLDDMAYVETLFGHADQVVDLDALALERCISVGARDRTARLWKVVEETQLVFRGG
GAIDKKRLPNIDPRSLAVEGSMDCVSMIDEELFVTGSDNGSIALWSLAKKKPLYVMPQAH
GLDPALKPEEISAEEVPDARIVPPPQPRWITALRTVPYSDVILSGSWDGVVKVWKLSDDK
RSILPVGNLGEPSSRDSPEFNGVSEDSDDQKKNNGPQIGREPWVVKGVINDLSVFERGDR
GRDGLCVVAALGKDHRLGKWKKVQGGRNGAVVYEIPKLGKSVVTNGDKATQ
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttcttcaccgtgcccggggcgcagaagaagcgcaagcaggctcccacgact
gcagacggccccaagaaacgatttgcaggcacgggcaaaccctctggcaaagcaaccaaa
gctccgccgaaagccgcacctcaaaacaggcggcaagaacgcgatgacgagtcaatctct
ggcagcgattccgaggatgacaatgttgcggccgacgatgaggaggctcaggactctggg
tccgactcggaaagggagggcgaaaccgccgcagagaagcgattgcgtctcgccgagcga
tatctggagcgcgtacggcagcaagaggaaatggccgtaggcttcaatgccgaagacgtc
gatcgcgatattattgccgaacggttaaaggaggacgttgccgtcttcaagggcaaggtt
ttccgtcagcttgccgacgaattggctactgataaggcgtcacattgcctgtttcgagcc
gatactctaacaacgaccaatatcaccacgtgcgctccattctgctacacagcttccaag
gatcggaccataatcaagtggaggatacaagatcttcccaagtatcaatatccccaaaag
accaagaaaaagcccaagaagcaagcgccgccaaagaaacgaccagaaaaagtcgccgta
atcaagccttccaaatcaaaggacaaggactttcaaggacatgtggctggcgagattcta
tgtattgctgcatcacaggatggaaaattcttggtcactggcggcacggatcgccgtcta
tgcgtttacgacgccaacaccatgaagcctctcaaggcatggacacaccaccgtgacgcc
gtcacagctctagtctttcggagagggtcgaatcaactgtactcggcatcaaaagacagg
acggtcaaggtttggagtctcgacgacatggcatacgtagagacgctgtttggtcatgcc
gaccaagttgtggatcttgatgccctcgcccttgaacgctgcatctctgttggtgctcgt
gaccgaacagccagactgtggaaggtggtagaagagacacaactcgtattccgaggtggc
ggcgccattgacaagaaacgattaccaaacattgatcctcgatctttagctgtcgaaggc
agcatggactgtgtatccatgattgatgaagaattatttgtcactggatctgataatgga
agcattgcgctttggagtttggcaaagaagaagccgctctatgtcatgcctcaagcgcat
ggccttgacccggctttgaagccggaagaaatatctgcagaggaagttccggatgctcgt
attgtaccaccccctcagccacggtggattactgcattgaggactgttccctactcggat
gtgattctctctggatcatgggacggtgtcgtcaaagtctggaagctgagcgacgacaag
aggtcaatactacctgttggcaacttgggcgagcctagctcgagagattccccagagttc
aatggtgtatccgaggactctgacgatcaaaagaagaacaatggcccccaaataggccgc
gaaccctgggtcgtcaagggagtcattaatgatttgtcggtatttgaaagaggtgatcgc
ggtagagacggcttgtgtgtcgtggcagccctgggcaaagaccacaggttaggcaagtgg
aaaaaggtgcagggaggtagaaacggtgctgtggtatatgaaatcccaaagttgggcaag
tcggttgtgaccaacggcgataaggctacacaatga
DBGET
integrated database retrieval system