Pestalotiopsis fici: PFICI_12448
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Entry
PFICI_12448 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K03140
transcription initiation factor TFIID/TFIIF subunit
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03022
Basal transcription factors
pfy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PFICI_12448
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PFICI_12448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfy03021
]
PFICI_12448
03036 Chromosome and associated proteins [BR:
pfy03036
]
PFICI_12448
Transcription machinery [BR:
pfy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PFICI_12448
Coactivators
SWI/SNF complex
PFICI_12448
Chromosome and associated proteins [BR:
pfy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NuA3 complex
PFICI_12448
Chromatin remodeling factors
INO80 complex (yeast)
PFICI_12448
SWI/SNF complex
PFICI_12448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YEATS
pYEATS
BET
C1q
Motif
Other DBs
NCBI-GeneID:
19277461
NCBI-ProteinID:
XP_007839220
UniProt:
W3WNY1
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MAPLDSDFGGEAAGLLNELAWDGPPRRSTRERNTTSYFAAELTEPTRKPRQAPKRKRQVA
DEAEDDDAELDEMQIEFTDTIAPQQRKVKLVTEQKNIDKESPVPEFPMKEWNVKIYMVDQ
DGNEKPATAFNKVTYNLHPSFENPSQTFTEPPYTCKNEGWGEFEMSIDMYTTEKTKCTVY
HDLNFQKPRYETIQTIQIKNPSQALLQILRETGPVASDDDPKLAKARKANDGKKRKAGYD
FEKMADGLTKLGEDELLHVIQLIHDHKNEDTYTKNDMDNGEFSVDLFTLPDNLARLIWDF
LLEQKLVSA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgacagtgacttcggtggcgaggcggctggtctgcttaacgagctggcc
tgggacggacctcccagacgctcaactcgtgagagaaacaccacatcatacttcgctgcc
gagctcactgagcctacccgcaagccccgacaggccccgaagcgcaagagacaggttgca
gacgaagccgaggacgacgacgcagagctagacgagatgcagatcgaattcactgacacc
attgcacctcaacagcggaaggtcaagctcgtcaccgagcaaaagaacattgacaaggag
tcgcctgttcccgagtttcccatgaaagagtggaatgtcaagatttatatggtcgatcag
gatggcaacgagaagcccgccaccgccttcaacaaggttacctacaacctccacccttcc
ttcgagaatccaagtcagacattcacggagcctccttacacttgcaagaatgagggttgg
ggtgaattcgaaatgtccatcgacatgtacaccactgagaagaccaagtgcactgtctac
cacgacttgaacttccagaagccgcgctacgaaactattcagacgattcagatcaagaac
ccttcgcaggctttgctgcagattctgcgcgagactggcccggttgctagcgacgatgac
ccaaagctcgccaaggctcgcaaggcaaacgatggcaagaagagaaaggctggctacgat
ttcgagaagatggctgatggactcaccaagctcggcgaggacgaattgctccacgtcatc
cagctcatccacgaccacaagaatgaagacacctacaccaagaatgacatggacaacggc
gaattctcggttgacctctttaccttgcccgataatcttgcccgactgatttgggacttc
cttcttgagcagaagcttgtctctgcatag
DBGET
integrated database retrieval system