Pestalotiopsis fici: PFICI_12469
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Entry
PFICI_12469 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PFICI_12469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_12469
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PFICI_12469
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
19277482
NCBI-ProteinID:
XP_007839241
UniProt:
W3WNM8
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MAPQLVDKVYLPDLEPCLKGEITVLSWRLVASALADTTGHRQGSQAIVDFLTNPAVQAFF
TKPGTVFETVNNANDPHKQAFETRTSAVQVTPAPSDKYDIKTIKDDSTWLSKNARINLLA
ALRIVVIEFQSRPRSQLTGPISTQDVANLQEAAGATNAQASNILPGLNLAATRDAVELQS
DFERDDARRRRIFKTYLAERRYFAMTTDHLFTLMLHEQLPSCSANDATRRIRDSFLEAYG
LTSQTPSAEGPAKTYHALIAQYFTLTSDNIKACEDITSTAEDQNLHDDEMQIEWMKTFLT
EAIHAMTVSFQLLDLCSQVLVSPELLKQWFQFIGDTSFLDVLGTVEGIAQLIPPVQCLVC
VISLTLLNLPRVMGHFSGEQEVDSSIEYLGYSDALLMVHEVIINAVDRNVASALPVALAW
VPVLHSMYSSYQQRAEQRDAIQNQKAIESYDSGTQMIPGAGRRNSAGSITTIDKTGYDDF
LAMTSMERDIQPALLLGAAATGDGLVYEIVSEMARCLGSSETAIFASSVGSRMRMSLISL
LKCTHSFIGYKGEPIMALLALLSGGDGYWQLTTPSILLPKDDIILRTLGDEFTLENFLLQ
ALQRFPYEFLPFISFCRQLASTTHSTGENHDAVLKLLKKTPHITFELPNDFNEYELAQED
EGLNAMRFLDDFPLFEITSSRKRVSAEEDSFVIPAGTYGRFMSDSGRIVLMEYEHSTLAL
LGKRLAVNLSPSIYRLELGVLSDEEVAEIISLFATLIRVETTKASRNSDKEHATVPGLAI
VAEASSALKRTKDIISVVCDILDVYLENEPDSAMLSIVTACLQFLHAIVPLQPGRVWSYI
GRCALLSNESRGGRLSRLTGTLELSSEQYNFLITATRLFNTLVDSAMSSSVQRKTPSKAN
TRQQGFENVWLGVSDKLITQVTFAISQASVDMLESSSTWRFSSELQRTVLIRDLIPILNK
FILHTYSMGELTSKKKLTAPLEMAAKYIIDSFLAPSSGSLRIQPLLATLAVAVHWPGTTV
YANGLKALSDRTIAVLQLATTLVRVANLFDQSSTTIELQLFKASPFIARVCAAHEGFRGP
TISLLEALVVSAGEATGEPPSLLGYLGPQTSRSFLQLLSSLDKPFNQTAEVSIVWRFFST
IVRNRQQWMANCLLTGKTPRDARNGHDKASQPSANSVLLSALDRLSSISSIPPAEALSIL
DFITSAQNYWPWTIFNMQKNTAFMTALRKYVKDLKSSNVISKANMLQACDEARLAAYIAE
TFAMQLFHLRQMGQADGLAKDLAQDLDYFLREGVLVSGYNDSLHANFARNFDNKYTGCSL
SEFKRTLLEPRSLGNEYYYALNYADTMLKFDNGWSGVRGNGFKSEMEKANANLSLVDAQI
ALFHAWEFLLLELSHCLPNSDALKKQTLQVAEQCLEANEATQGHEQIFERLTESRVNLAL
LLVQRVADNTPSAADVAQLLNALWSTVSIIKEPYQSESISLYRTLLKLLYVTLRAQVKAS
DAKLTKSVAQKRAVNDSSSNVSQTVLGILDGVVAKGFRTLVSLIHDSDASVYPEDIAILN
AILQACLCVPGISQNQTQIVNIMAAHDAVHVAVSLFSWADKLAEKGDPVYGELSLLFLLE
LSALPVVAEQLACDGLLNNLTSASLANYLNRPNVSPFADSVGPQRCYSIWAKGVVPLLLN
VLTALGPTIAPEVAYVLNQFPNLTAASIERFEAPGVSRTQTDRSKSSYITLLAVSEIHDL
ALLTRVLGALRANNVRDIPEVEWDAASALENVEFWLGSRKILRERLVPLGQREIEWKGSK
PTESGKARGYESRLEEKVVEQLEGVRAVLGEELE
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacagctagtcgacaaggtctacttgccagatctcgagccctgcctgaagggc
gaaattactgtgctctcatggaggctcgtcgcatccgcccttgcagacaccaccggacat
cgtcaaggcagtcaagccatcgttgacttcctcaccaacccggctgttcaagcattcttt
accaagcccggtaccgtcttcgagaccgtaaacaacgccaatgacccgcacaagcaagct
ttcgaaacgcggacctctgccgtgcaggtcacgcccgcgcccagcgacaaatatgatatc
aagacaatcaaggatgactcgacttggttgagcaagaatgcacgcatcaatcttcttgca
gctctgcggattgttgtgatcgaattccagtcgcgtccccgaagtcaactcaccggccca
atttcgactcaagatgtcgccaacctacaagaagccgctggtgcaacaaatgcccaggct
tccaacattctgccaggtctcaatcttgctgccacccgggatgctgttgagctccaatcc
gactttgagagggatgatgctcgcagacgccgtatctttaagacatacctggctgagcgt
cggtattttgccatgacaacggatcacctattcacattgatgctgcacgaacagctacct
tcatgctctgcgaatgacgcgacaagaaggattagggactctttcttggaggcatacggt
ctgacgtcgcaaacgccgtcagccgaagggcctgcaaaaacctatcacgcattgatagct
caatactttactttgacgtctgacaatatcaaggcctgtgaggacatcacctccactgcg
gaggatcagaacctccatgatgacgagatgcaaatagaatggatgaagacctttctcacc
gaagccattcatgccatgactgtttctttccagctattggatctctgcagtcaggttctg
gtctcccccgagctgttgaagcagtggttccagtttatcggcgatacctcgttccttgat
gtactcggaacagtcgagggaattgctcaactcataccaccagtacagtgccttgtctgc
gtcatctcgctcacgctactcaaccttccacgagtgatgggccacttttctggtgagcag
gaagttgatagcagtatagagtatctcggatattcagatgctctcctcatggtgcatgag
gtcatcatcaatgcagtagatcgaaatgttgcctctgcactgccagtggcgttagcctgg
gtaccagtcttgcacagcatgtactcctcatatcaacagcgcgctgaacagcgagatgca
attcaaaaccagaaagccattgagtcgtatgactcggggacacagatgattccaggcgct
ggcagaaggaactcagccggtagcattacaactattgacaagactggatacgacgatttc
cttgccatgacatctatggaacgggatatccaacctgctctcttgctcggggcggctgct
accggcgatggtttggtgtatgaaatagtttccgaaatggctcgatgtctaggttcttcc
gagactgctatctttgcatcttcagttgggtcgcggatgcgaatgtcactcataagcctg
ctcaagtgcacccacagctttatcggttacaaaggggagccgatcatggctttactagcc
ctgctatccggaggtgatggttactggcagttgacgacgccaagcattctgctgcccaag
gacgatatcatcctacgaacgctcggtgacgaatttactctcgagaactttctacttcaa
gccttgcagcgttttccatacgagtttctaccattcattagtttctgtcgacaattggcc
tcgacgacgcactccacgggcgaaaatcacgatgctgtactcaaacttctcaagaaaaca
ccgcatattactttcgagctgccgaacgactttaacgagtatgagctagctcaagaggat
gaaggcttgaacgcgatgcgattcctcgacgactttcccctctttgagataacttcaagc
cgtaaacgcgtttccgcagaggaagattcctttgtcataccggccggcacatatggtcgc
ttcatgagcgattcgggcagaattgtgttgatggaatatgagcattctactttggctctg
ctcggtaaacgcctggcagtgaatctatcgccaagcatctatcgactcgaactcggagta
ttgagtgatgaagaggttgcagagatcatctctctctttgcaactttaatccgtgttgag
actaccaaagcgtccagaaattcagacaaggaacatgccactgtgcctggattggcgatt
gtagctgaagccagcagcgctctcaagcggactaaggatatcatctctgtggtttgcgac
attctcgatgtctacctcgagaatgaacccgatagcgccatgctgtctatcgtcactgca
tgtcttcaattcctccatgctatcgtgccactacagccaggtcgggtttggtcgtatatt
ggtcgctgtgcgttgttgagtaatgagtcgcgcggcggacgtctttcgcgactaaccgga
accttggaactttccagtgagcagtacaacttcctgatcactgcaacaaggctatttaat
accctcgtggatagcgccatgagcagttcagtccaaaggaaaacacccagcaaggccaac
actaggcagcaaggctttgaaaatgtatggctgggagtctcggataagctgatcactcaa
gtcacatttgcgatatctcaagcttctgtcgacatgttggaaagctcttcgacatggcgg
ttctcgtctgaactacaacgcacagtactcatacgggatctgatccctatactgaacaag
ttcattcttcacacatatagcatgggcgaattgactagcaagaagaagctgaccgccccc
ctggagatggccgcaaagtatataattgacagtttcctggcgccttcgtcaggaagcttg
cgtattcagccactgctggccactttggcggtagctgttcactggccagggacgacggtc
tatgcaaacggactgaaggccctcagtgaccggaccattgctgtcctgcaactggccaca
accttggtcagagttgcaaacctctttgaccaatcatcaactactatagagctgcaactc
ttcaaagctagtccgttcatcgcgcgcgtttgtgctgcccacgaagggttcaggggtcca
actatttcgcttttggaagcacttgtcgtcagtgctggagaagctacaggagagcctcca
tcactacttggatatctgggaccacaaacctcaaggtcatttttgcaactgctttcatcg
ctagacaaacctttcaaccagacagcagaagtaagcatcgtttggcggttcttctcgact
attgttcgaaacagacaacaatggatggccaattgtcttctcacgggcaaaacaccgcgc
gatgcaagaaacggtcatgacaaggcctctcagccatcagcaaactctgttctactttct
gccctggaccgactctcatccatctcttccatacccccggctgaagcactatcgatactg
gacttcatcacatcggcccagaattactggccctggacgatcttcaacatgcaaaagaac
acggcctttatgacagccctacggaaatacgtaaaggacctcaagtcttcaaacgtaatc
tccaaagcaaatatgcttcaagcctgcgacgaagcccgtctggctgcctacattgccgag
acttttgctatgcagctatttcacctccgtcaaatgggccaggccgacggcttggcgaaa
gacctcgcacaagatctggattacttccttagagaaggcgtattggtctcgggctacaac
gactctttgcatgccaattttgctaggaactttgacaacaagtatacaggttgcagcctc
agcgagtttaaaagaacgctactagaacctcgttcgttgggcaacgaatactattacgct
ctcaattatgccgataccatgttgaaattcgacaatggatggtctggggttcgaggaaat
ggattcaagagcgaaatggaaaaggcaaatgcgaatctctctctcgtagacgcccaaatt
gctctattccatgcatgggaattccttctgctagagcttagtcactgtctccccaatagc
gacgccctcaagaagcaaactctgcaagttgctgagcagtgtctggaggccaacgaggcg
acccagggacatgaacaaatctttgagagactgaccgagtcccgggtgaaccttgcacta
ttgctcgtacagcgggtcgctgacaatacgccgtccgctgcagacgtagcgcaactgctg
aatgctttgtggtcaacagtcagcatcatcaaagaaccatatcagtcggagagcatctcg
ctgtatcggacacttctcaagctcctatacgtgactttgcgggcgcaagtcaaggcatct
gatgcaaaattgacaaaaagcgttgctcaaaagcgggctgtcaatgactcatcatcaaat
gtctcacagacggtgttgggaattctggacggtgtcgtagcaaagggcttccgcactttg
gtctcactgatccatgattctgatgcttccgtctatccagaagacattgccattctcaat
gctattctgcaggcttgtctttgcgttcctggcattagccagaatcagacacagattgtc
aatatcatggctgcccatgacgccgtgcacgttgccgtctcattgttctcctgggctgat
aagctggcagagaagggcgatccagtctatggtgaactatcactgcttttcttgcttgaa
ttgtcagcgttacccgttgttgcagagcaacttgcgtgtgatgggctcttgaacaacttg
acctcggcatctctggcaaactacctcaaccgaccgaatgtgtcgccgtttgcagactct
gtaggtccgcagcggtgctacagtatttgggccaagggcgtcgtaccactgctcctcaat
gtgttgacagcattgggcccgacaattgcgcccgaggtagcctatgttttgaatcagttc
ccgaacttgacggccgccagcatagagcgctttgaagcgccgggagtaagccgtacacag
acagatcgtagtaagtcgtcgtacataacgcttctcgccgtttcagagatacacgatctg
gccctgctcacgcgggttcttggcgctttacgtgcaaacaatgtccgggacattcccgag
gtggaatgggatgcggctagcgccctggagaatgtggaattctggctcggaagtcgcaag
attcttagagagagattagtaccgctcggccagagagagattgagtggaaaggcagcaaa
ccgacggaaagcggcaaggcccgaggatatgagagccgtttggaagaaaaggttgtcgag
cagttggaaggtgtaagagcagtactcggtgaagagctcgagtaa
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integrated database retrieval system
