Pestalotiopsis fici: PFICI_13107
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Entry
PFICI_13107 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFICI_13107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfy03019
]
PFICI_13107
Messenger RNA biogenesis [BR:
pfy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PFICI_13107
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PFICI_13107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
WKF
Motif
Other DBs
NCBI-GeneID:
19278120
NCBI-ProteinID:
XP_007839879
UniProt:
W3WL73
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MAARKLQQEVDKCFKKVAEGMADFDAIYEKIEQSTNPAQKEKLEDQLKREIKKLQRLRDQ
IKTWATGNDIKDKQPLLEQRKLIETKMESFKAVEKAMKTKAYSKEGLSAQQKLDPKEQAK
LDMSEWLAGQVEELEQQIESLEATSEGIQATLKKGKNQREKQERVANLDHHIERHRWHIS
KLELIRRSLENGGLEVEEIDNIKDSIEYYVKDNQADDFMEDEEMYEDLHLQDEEEAYGIG
HEGDKGSSQETQSVQDDTPEVESRPASLPSTKKQTSAEPTATSGRRPSTQLKSPLPTLAT
LHNPSSSSSTNGGAAVAGGMKPASVPPRTEGLKYASAAAAAAKENSLGIAPLPPPQGAPP
VAAVSSISQQARSSAANSPSIPPIQPAPLETKTGASIAQVETKIPDATPATPAQSKKAEK
AAAKAAAKAAREADAAESSRASQANGLANGVKSTPVQEDKEEECVYHLPASLSDLVESFE
ITKKRSLQVNAPSQMRMLQVSQANTPDIGDAEAPRRYKPDQRYPFPTQYPQEPLAIFDDP
RLYAKIDPDTLFYVFYYKQGTYQQYLAAKALKDQSWRFHKQYQTWFQRHEEPKSITEEFE
QGTYRFFDYESTWMNRRKADFKFAYRFLEDEV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaggaaactgcaacaggaagtcgacaagtgcttcaaaaaggtcgccgagggc
atggccgatttcgatgcgatttatgagaaaatagaacagtccacaaatccagcgcaaaag
gagaagctcgaagaccaactgaagcgggagatcaagaaactgcaacggttacgagatcag
atcaaaacgtgggctacaggcaatgacattaaggacaagcagccgcttttggagcagcgc
aaactgatcgagacgaaaatggaatcgttcaaggctgtggaaaaagcgatgaagacgaaa
gcctactccaaggaaggtctgtcggcccaacagaagctcgatccgaaggaacaagccaaa
ttagatatgagcgaatggctagccggtcaggtcgaggagctcgaacaacagattgagtcg
ctcgaggctacaagcgaaggtatacaagctacgctgaaaaagggcaagaaccagagagaa
aagcaggaacgtgtcgccaacctcgaccaccacatcgagcgacatagatggcacataagc
aaactcgaactcatcaggcgatccttggaaaacggcgggctcgaagtcgaagaaattgat
aacatcaaggactctatcgagtactatgtcaaggacaaccaagcagatgacttcatggag
gatgaggaaatgtacgaagacctgcatctgcaagacgaggaggaagcttatggcattgga
cacgagggagataaggggtcgtctcaagaaacgcaatccgtacaggacgacactccggaa
gttgagtcgaggcctgccagcttgccgagcacgaagaagcagacttccgccgaaccgaca
gctacctcgggacgcagaccttcgacacaactcaagtcccccctaccgacgctcgccact
ctacataacccgtcttcttcaagttcaacaaatggtggcgcagcggtcgccggtggtatg
aagccagcgtccgttccgccgcgcacagaaggtttgaagtatgcttcagcggctgcagcg
gctgcgaaggagaatagtctaggtattgcgccactgcctccgccgcaaggagctccgcct
gtggctgcagtgtccagcatctcgcaacaggcgcggtctagtgcggcaaactcgccgagc
ataccgccgatacaacctgctcccttggaaacgaaaacaggggcttctattgcccaagtc
gagacaaagattccggacgccacacccgctacacccgcacagtctaagaaggcagagaag
gcagcggccaaggcggcagccaaggcagcaagagaagcagatgctgccgaatcttcgaga
gcttcgcaagccaacggcctggccaatggcgtcaagtctacaccagttcaggaggataag
gaagaagaatgcgtctatcacctcccggcatcattgtcagaccttgtggagtctttcgag
atcaccaaaaagcgtagcctccaggtgaacgccccttcacaaatgcggatgctgcaagtg
tcgcaagcaaatacgccagatatcggtgacgcagaggctcctcggaggtataagcctgat
cagcgctacccgttcccaactcagtaccctcaagaaccgctggctatctttgatgatcca
cggctttatgccaagattgatcctgacacgctgttttacgtattctactacaagcagggg
acatatcagcaatatttggcagccaaggcattgaaggatcagagctggcgattccacaag
caatatcagacttggttccaaaggcacgaagagcccaaatctatcacggaagagtttgag
cagggaacctaccgctttttcgattatgagagcacctggatgaaccgtcgcaaggcagac
ttcaagtttgcctaccgattccttgaggatgaggtataa
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