Pestalotiopsis fici: PFICI_13385
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Entry
PFICI_13385 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03030
DNA replication
pfy03420
Nucleotide excision repair
pfy03430
Mismatch repair
pfy03440
Homologous recombination
pfy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFICI_13385
03420 Nucleotide excision repair
PFICI_13385
03430 Mismatch repair
PFICI_13385
03440 Homologous recombination
PFICI_13385
03460 Fanconi anemia pathway
PFICI_13385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfy03000
]
PFICI_13385
03032 DNA replication proteins [BR:
pfy03032
]
PFICI_13385
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_13385
Transcription factors [BR:
pfy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PFICI_13385
DNA replication proteins [BR:
pfy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PFICI_13385
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PFICI_13385
MMR (mismatch excision repair)
PFICI_13385
DSBR (double strand breaks repair)
HR (homologous recombination)
PFICI_13385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
RADX
Motif
Other DBs
NCBI-GeneID:
19278398
NCBI-ProteinID:
XP_007840157
UniProt:
W3WQ03
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MSASDARRAITEGALDAIFADQAIANERFPVPVLQCLQIKPLAAGPAGGNSAERYRVVLS
DVSKYVQCMLATQANHVIHDETLVRGCIVRIKSYQANSVKGKNILIILDLEVAEELGVHE
KIGDPKANAVTSETTETTIGGTGFYGKKSESVKPEPSAPIKSEPMSSRFGGGGPAKQSSA
VSTKIMPIEALSPYANKWTIKARVSSKSDVRTWHKNTGEGKLFSVNLLDESGEIKATGFN
DQVDQFFDLLQEGQVYYISNPCRVQMAKKQFTNLPNDYELTFERDTVIEKAEDQSSVPQV
RFDFVTIEELQGIEKDTTIDVIGILKEVGETSQITSKSTSKSYEKRELTIVDDSNFSVRL
TIWGKTANEFMTPVESVVAFKGVKVSDFGGKSLSLLSSGKVTVDPDISEAHRLKGWYDSQ
GRHGDFTTHQHSNTLGNATNRENQMKTIQQIKDENLGMDDKVEYFSLKATVVYIKQETFC
YPACPNEGCNKKVVDQGDGWRCEKCDATHPQPQYRYIMQINVNDHTGQLWLSCFDDTGRQ
IMDMSADHAMNLRETDEASLTAAFDRANCTKFTFRVRAKMDTYGEVSRVRYQVMSASPID
YAGEARALADMIKQFGI
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcagacgcgcgacgagcaatcaccgagggcgccttggatgccatcttcgcc
gatcaagccatcgcaaacgagagattccccgttccagtccttcaatgtctccagatcaag
cctctggccgcaggtccagcaggtggcaacagtgccgagcgataccgagttgttctcagt
gatgttagcaaatatgtccagtgcatgctggcaacccaggccaaccacgttatacatgat
gaaacgcttgttcggggatgcatcgtgcgtatcaagtcataccaggccaactcagtcaag
ggcaagaatatcctcattattctggacctggaggttgctgaagagttgggcgtccacgaa
aaaatcggcgaccctaaagccaatgccgtaacctctgaaaccactgaaaccacaattggt
ggaactggtttttacggcaagaagtctgagtctgtgaagcctgagccgtctgctccgata
aaatcggagcccatgtcttctcgctttggtggcggcggcccagcaaagcagtccagtgct
gtctctaccaaaatcatgcctattgaggctctttctccttatgccaataagtggactatc
aaagctagagtatcttccaagtccgacgtcaggacctggcataagaacacgggcgagggg
aaactcttctcagtcaatttgctcgatgagtctggcgagatcaaggcaactggattcaac
gaccaagttgatcaattcttcgatctcttgcaagagggccaggtttactatatcagcaat
ccttgccgagtccaaatggccaagaagcaattcacaaacctgcccaacgactacgaattg
acctttgagcgagacaccgtcattgagaaggctgaggaccaatccagtgtcccccaggtt
cgtttcgactttgtcaccattgaagaactccagggcatcgaaaaggacaccaccattgac
gtcattggaattctgaaagaggttggcgagacgtcgcaaatcacatccaagagcaccagc
aagagttacgagaagcgcgagctcactattgtcgatgactccaacttctctgtccgcctg
acaatctggggcaagactgccaatgagttcatgacaccggtggagtcggtagtagcattc
aagggagttaaggtgtcagattttggaggaaaatctctttctctgctgtcatctggtaaa
gtaacagtcgaccccgacatctcggaagcccataggctcaagggatggtacgactcacag
ggtcgccacggagatttcaccacacatcaacacagcaacacccttggcaatgcgacaaat
cgtgaaaatcagatgaagaccattcaacagatcaaggacgaaaacctgggcatggacgac
aaggttgaatacttctcgctcaaggcaacagtggtttacatcaagcaggagactttctgc
taccctgcatgccctaacgagggctgtaacaagaaagtggttgatcaaggtgacggctgg
cgatgcgagaagtgcgatgccactcatccacaaccgcagtaccgctacattatgcaaatc
aacgtcaacgatcataccggacagctctggctcagttgcttcgacgacacaggccgtcaa
attatggacatgtctgctgaccacgccatgaatctccgtgagacagatgaggcttcgctc
acggcagcattcgatcgagcaaactgcaccaaatttacattcagagtccgtgccaagatg
gatacctacggagaggtttcaagagtacgataccaggtcatgagtgcttcgcccatcgat
tatgcaggtgaggcgagggccttggcggatatgattaagcagtttggcatctag
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integrated database retrieval system
