Pestalotiopsis fici: PFICI_13548
Help
Entry
PFICI_13548 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03082
ATP-dependent chromatin remodeling
pfy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PFICI_13548
03083 Polycomb repressive complex
PFICI_13548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfy03036
]
PFICI_13548
Enzymes [BR:
pfy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PFICI_13548
Chromosome and associated proteins [BR:
pfy03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
PFICI_13548
HDAC complexes
Sin3A-HDAC complex
PFICI_13548
BRAF-HDAC complex
PFICI_13548
REST complex
PFICI_13548
SHIP complex
PFICI_13548
MiDAC complex
PFICI_13548
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
PFICI_13548
Heterochromatin formation proteins
Other heterochromatin formation proteins
PFICI_13548
Chromatin remodeling factors
NuRD complex
PFICI_13548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
19278561
NCBI-ProteinID:
XP_007840320
UniProt:
W3WMR9
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MAQAAPVDIANGNGIALGSASPKKVAYFYDSDIGNFAYVAGHPMKPHRIRLAHSLIMNYG
VYKKMEIYRAKPATRLEMTQFHTDEYIDFLQKVSPENMESYQREQSKFNVGDDCPVFDGL
FEFCGISAGGSMEGAARLNRQKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRF
NKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGQGKYYAVNF
PLRDGIDDSTYKSVFEPVIASVMEFYSPDAVVLQCGGDSLSGDRLGCFNLSMEGHANCVK
FVKSFNLPTLVLGGGGYTMRNVARTWAFETGLLVDANMPKTLPFNEYYEYYGPDYELAVR
ASNMENANSPEYLEKIKNQLIENLKRTAHVPSVQMQDVPPDFPQTMTEEEEAELEDLDED
ENKDVRMTQRQWENQRERENEYEESDNEELDRANGVHPQNGSAAGQKRQFTDYQKSDLDD
ESAAPTPTNGNTADTVIKSKELDEVMEDAQPEKEAEPEGIAAQEEQLKNAQVAASNADGD
GDVDMETEEAPKAPEKTDVKEEEAGSPKPDAPAESPKAAESKAPEAAMTAETTTTEKEPT
EPATEDKPAEPASDAQEAKAPEAPEDAMDVDEPKTEVKPAEDNEAPKPAEPEEPSSKPAD
ESKEKTGDEEKDKATE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagccgcccccgtcgacattgccaatggcaatggtatcgcgctcggcagcgct
tcgcccaagaaggttgcctacttttacgactcggacattggaaatttcgcctacgttgcc
ggtcatcccatgaagccacacagaatacgtctcgcccacagtttgatcatgaactatggc
gtctacaagaagatggaaatctaccgagccaagcctgccacacggctcgaaatgacccag
ttccacacggacgaatacattgatttcctgcaaaaggtcagccccgagaacatggagagt
tatcaacgcgagcagtcaaagttcaacgtcggagacgattgtcccgttttcgatggcctc
tttgagttttgcggcatcagtgcaggaggcagcatggagggcgcagcccgactcaaccgc
caaaagtgtgacattgctgtcaactgggcaggaggtcttcatcacgccaagaagagcgag
gctagtggtttctgctacgtgaatgacattgtgctgggtattcttgaactcctgcgtttc
aacaagcgcgtcctatacatcgacatcgacgtccaccatggagacggtgtggaggaggcc
ttttacacgaccgatcgagtcatgaccgtttctttccacaagtacggcgagtactttcct
ggaaccggtgaactgcgcgacattggtatcggccaaggcaaatactatgctgtcaatttc
ccccttcgagacggcatcgatgactccacatacaagtctgtctttgagcccgtcattgct
tctgtcatggaattctactcgcctgacgccgtggtcctgcaatgcggcggtgacagcttg
tctggagaccgtctcggctgcttcaacctgagtatggagggtcacgcaaactgcgtcaag
tttgtcaagagcttcaaccttcccaccctggtcctcggaggaggtggctacacgatgcgc
aacgttgcccgcacttgggccttcgagaccggattgttagtcgatgccaacatgcccaag
actctaccctttaatgaatattacgagtactatggaccggattacgaactggcagtccgt
gcatccaacatggaaaatgccaacagccctgaatacctcgaaaaaatcaagaaccagctc
attgagaatctgaagagaacagctcatgtgccttctgtgcagatgcaggatgtgccccct
gactttcctcagaccatgacagaagaggaggaagctgagttggaagatcttgacgaagac
gagaacaaggatgtccgcatgacacagcggcaatgggagaatcagagggagcgtgagaac
gagtatgaagagagtgataatgaggagctcgacagagccaatggcgtgcatccccagaac
ggaagcgctgccggacaaaagcgacaattcaccgactatcaaaaatccgacctggacgac
gaaagcgctgccccgactccgacaaacggcaacactgccgacactgtcatcaagtccaag
gagctcgatgaggttatggaggatgcccagcctgaaaaagaggccgagccggaaggcatt
gcagcccaggaggaacagttgaagaatgctcaagtcgccgcgagcaatgccgatggagat
ggcgacgttgatatggaaaccgaggaagcccccaaggccccagagaaaaccgacgttaag
gaagaggaggctggctcgccaaagcctgatgcgcctgctgaaagccccaaggccgccgaa
tcaaaggcccccgaggcggccatgactgctgaaacgacaactactgaaaaggagcctacc
gagccagccacagaggacaagcccgccgagcctgcaagcgatgctcaggaagccaaggct
ccggaggcaccagaggacgcaatggatgtcgacgagccaaagaccgaggtaaagcctgcc
gaggacaatgaagcgcccaagcctgccgagcctgaggaacccagctccaagcctgcagac
gagagcaaagagaagacaggcgatgaggaaaaggataaggcgaccgagtaa
DBGET
integrated database retrieval system
