Pestalotiopsis fici: PFICI_15128
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Entry
PFICI_15128 CDS
T04924
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
pfy
Pestalotiopsis fici
Pathway
pfy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PFICI_15128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfy03400
]
PFICI_15128
DNA repair and recombination proteins [BR:
pfy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PFICI_15128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
DUF3461
Motif
Other DBs
NCBI-GeneID:
19280141
NCBI-ProteinID:
XP_007841900
UniProt:
W3WH14
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MVEKAGPKTPSLVKRSSSSMSASGKQQQSILGFFSKASSQTGTSAASAKSTANNSTTTKQ
SPTNNSSPCLKEKTNLNSLQLNKKRPSITTPVPSSDAIEPSSSQENHSDATVKVYRDSLP
SPITPAELPSKQAALPKMMIGSSPSRKAKKTVSYAESSDEEDDEDTVVSRRPTRRSRAVV
KDDEDDYQEDSKDAVVEEDDVDMDDFVVSDDSDAPSKKRKRSAPKAQAARKRSHASSPPT
IQEEYEEDGIDELMEEIPSTSTAQQWKYDPESVNPVKMRSPSTSSKATAAKGKAHTREPE
DRYPWLAKITDLNRNPPGHPDYDPSTVYVPPMAWNKFSAFEKQYWEIKHKLWDTVVFFKK
GKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDIWVNQFIAKGYKVARVDQMES
ALGKEMRERDDKAKKQDKIIRRELACILTGGTLVDGAMLQDDNATYCVAIKEATIDDHPA
FGIAFVDAATGQFFISQFEDDIDLTKFETFVAQTNPRELLLEKSRISSKALRILKNNTAP
TTIWNYFKPTTEFWEADTTRRELGCNDYFKADDESEDTWPEVLAEAKSKDLLMSAMGALV
QYLRVLKIERSLLSQGNFTWYSPIHKNGTLILDGQTLINLEIFTNTVNGGSEGTLFNLLN
RCVTPFGKRMFRQWVCHPLCNTQKINERLDAVDLLNNNIEMREQFSANMTRMPDLERLIS
RVHAGACRPEDFVRVLEGFEQIEYTMSLLGAFGGGNGLVDRLIASMPDLGEPLSYWKSAF
DRKIAREEKMLIPARGIEEEFDASHDTIAEIKSRLNRLLTKKKSELNVKSIKFTDVGKEV
YQLEVPKSTKVPKDWRQMSATASVKRYYFKELSDLVRQLQEAEETHAQLIKEVAFSLFRR
FDVDYGTWLQAIRIISQLDCLISLAKSSAALGEPSCRPVFVDSDRTVVDFQELRHPCMLN
TVDDFIPNDIVLGGEAAKISLLTGANAAGKSTVLRMSCVAVIMAQIGHYIPATSARLSPV
DRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQA
VLHHVASHIGCVGFFATHYHSLATEFESHPEIQPKRMKIDVDDANRRVTFLYRLEDGVAE
GSFGMHCAAMCGIKDSVIERAEEAAKEWEHTSRLKESLEKAREGCWIPLGVLSDVAAVLD
PSKSEDVSSRSLDVLLKAIEAL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaaagctggtccaaagacgccttccttggtgaagaggtcgagctcgtcgatg
tcggcttcaggcaaacagcagcagagcattctaggcttcttttccaaagcgtcgtctcag
actggaacatccgctgcctcagcaaaatccacagccaataacagcaccaccacaaagcag
tcgcccacaaacaattcatcgccatgcctcaaagaaaagaccaacctcaactccctccag
ctgaacaagaagcggccgtctatcaccactcccgtccctagcagtgacgctatcgagcct
tccagctcccaggagaaccactcagacgccactgtcaaggtataccgcgactcgcttcca
tcgccaattacacctgctgagctcccatccaagcaggcagcactaccaaaaatgatgatt
ggaagcagcccttcacgcaaagcgaagaagaccgttagttacgcagaatcttcggacgaa
gaagacgacgaggacactgtggtgtctagaagaccaacacgccgctcgcgggcagtcgtc
aaagatgacgaggatgactatcaagaggacagcaaagatgccgtggtggaagaagacgat
gtggacatggacgattttgtcgtctcagatgattcagacgcaccttccaagaaacgcaaa
cgctctgcccccaaagcacaggcagcccgaaagcgttcgcatgcatcctcgccgccaact
atccaagaggaatatgaggaagacggaattgacgagcttatggaagaaatccccagtacc
tccaccgcacagcagtggaagtacgatccagaaagtgtcaatcctgtcaagatgcgatct
ccatccacatcttccaaggcaaccgcagcaaaaggcaaagcgcacacaagagagcccgag
gacagatatccatggttggccaagatcaccgacctgaatcgaaatccccccggccaccca
gattacgacccctcgaccgtatacgtgcctcccatggcttggaacaaattctcggcattc
gagaagcaatactgggaaatcaaacacaagctttgggatactgttgtcttctttaaaaag
ggaaagttctacgagctgtatgagaatgacgcaaccataggccaccagctctttgacctt
aaactgactgatcgtgtcaatatgcgcatggtgggagtcccagagagttcgctggacatc
tgggtgaaccagttcattgccaagggttacaaggtcgctcgagtcgatcagatggagagt
gctcttggcaaggagatgcgtgagcgtgatgacaaggccaagaagcaggacaagattatc
cggcgagaactggcttgcattctgactggcggaacactcgtcgacggtgccatgctgcaa
gatgacaatgccacctactgcgtcgccatcaaggaggcaactattgatgaccaccctgcc
ttcggtatagcctttgtcgatgcggcgactggccaatttttcatctcgcaatttgaagat
gacattgatctgacaaagttcgagacttttgtggcacagaccaacccccgagagcttctg
ctcgagaagtctcgcatctcctcaaaggcacttcgcatactgaagaacaatacggctccc
acaacaatttggaattacttcaagccgaccactgaattttgggaggccgacaccacccgt
cgcgaactcggttgcaatgattatttcaaggcagacgatgagtcagaggatacatggcca
gaggttctggcagaagcaaagagcaaagacctgctcatgtcggcaatgggtgccttggtt
caatatctccgtgtgctaaagatcgagcgtagccttctctcgcaaggcaattttacttgg
tatagtcccattcataagaatggcacactaatccttgatgggcaaacgctcatcaacctc
gagatttttaccaacaccgtcaatggcggctccgaaggcacgctcttcaatctcttgaat
cgctgcgtgacaccattcggaaagagaatgtttcggcaatgggtgtgccaccctctgtgc
aacacgcagaagatcaacgagagattggacgcggttgacctgctcaataacaatattgag
atgcgcgagcaattttcagcaaacatgacacgcatgcccgatctggaacgtctcatctct
cgggtgcatgcgggcgcttgcagacctgaggattttgtacgggtactagaaggttttgaa
cagattgagtataccatgagtcttttgggagcattcgggggcggcaacggtctagtggat
cgcctcattgcatccatgcctgaccttggagagcctctgtcgtattggaagtcagcgttt
gatcgcaagatcgctcgggaggagaaaatgttgatccctgcacgagggatcgaggaggag
tttgacgccagccatgacacaattgcggagatcaagtcgcggctaaatcgtcttcttacg
aagaagaagagcgagctcaatgtcaagagcatcaagttcactgatgtcggcaaagaagtg
tatcagcttgaagtacccaagagcaccaaggtacccaaggactggcgccagatgtcggca
acagccagtgtcaaacgttactacttcaaggagctgtcagaccttgttcgccagctccaa
gaagctgaagagacccatgcgcaacttataaaagaggttgcgttcagtctattcagacgc
ttcgatgtggattacggtacttggctgcaggccattcgtatcatttcacagcttgactgc
ctcatcagtctcgccaaatcttctgctgcacttggcgaacctagttgccgcccagtattt
gtcgattcggaccgtaccgtggtcgactttcaagaattgaggcacccctgcatgctcaat
accgtggatgatttcatacccaacgacattgttctcggtggagaagcggccaagatcagt
ctactcacgggtgccaatgctgctggaaagtcaacagtcctccgcatgtcatgtgttgca
gtcatcatggctcaaattggtcactacattccggcaaccagtgcacgtctatcgccagta
gatcgcatcatgagccgacttggtgccaacgacaatatatttgcggcacagtcgaccttc
tttgtcgaattatccgagaccaagaagattctctcggaagctactcccagatcactggtc
attctggatgagctgggccgtggtacctcttcctatgatggtgttgcagtcgcacaagct
gtcttgcaccacgtcgccagtcacattggctgtgtaggattcttcgccacccattaccat
tccctagctaccgagttcgagtcacaccccgagatccaacccaagcgcatgaagattgat
gtcgatgatgccaaccggagagtcacatttctttacaggctcgaagatggcgtggcagaa
ggcagttttggtatgcactgcgcagccatgtgcggcatcaaggatagtgtgatcgagagg
gcagaggaagctgccaaagaatgggagcacacgtccaggctcaaggagagcctggagaag
gcaagagaaggctgctggatcccgctcggagtcctcagcgatgttgcagctgtccttgat
ccaagcaaaagcgaagacgtcagctctaggagtttagatgttctcctcaaggcaatcgaa
gctctttga
DBGET
integrated database retrieval system
